Penaeus japonicus (kuruma prawn): 122251514 Help Entry 122251514         CDS       T07703                                  Name (RefSeq) helicase SKI2W-like   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism pja  Penaeus japonicus (kuruma prawn) Pathway pja03018   RNA degradation Brite KEGG Orthology (KO) [BR:pja00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     122251514  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pja03019]     122251514 Enzymes [BR:pja01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      122251514 Messenger RNA biogenesis [BR:pja03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      122251514   mRNA degradation factors    3'-5' decay     Ski complex      122251514 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel DEXQc_Suv3 Helicase_C ResIII MTR4-like_stalk DUF3516 Ntox28 Motif Other DBs NCBI-GeneID:  122251514 NCBI-ProteinID:  XP_042869460 LinkDB All DBs Position Unknown AA seq 1219 aa AA seqDB search MGSLSWLPAGLPPVLPTLKEQIEEYLLMPEELPIHAPIHSRRWFPRTPSPRRLYRLTLFP VTSCLEVERDPATGHITGVREVSNSDAGATAKNSMSMRRAPGPPEEMVRGSSTNLPFWPG GFPEPTLDKESTEGEHELDLTNLVTKHPRLSRGITFEEPEPPPQEPQSQEETKEPEEKKS SDLVVSISDMLMVDESVLKIFDVKEEQTKKPATLTLEDLNEEDSNLIQTFKIEPAPKKEE FVLNISEVPVEVELSGPSTEWAEKVDVHAPVDDFHTRVPNPACTYPFELDIFQKQAILHL ENRESVFVAAHTSAGKTVVAEYAIALTLKHMTRAIYTSPIKALSNQKYRDLKIKFEDVGL LTGDIQINPKASCLIMTTEILQSMLYNGSDLIRDLEWVIFDEVHYINNAERGHVWEEVLI MLPERVSIVLLSATVPNTIEFADWIGRIKKRKIYVISTTKRPVPLEHFLYTGMGGKSKDE RFLLIDAQGKFVTKGYNNALAAKNEKKSKMQQQQHGPKHMRQHMGEKQEKNMWIGLIDHL SKRELLPIVAFTLSKKRCDSNASQLLSQDLTTSAEKGEIHSFIKRCTERLQGADRELPQV VYMQELLTKGIGVHHSGILPILKEVVEMLFAKGLVKLLFATETFAMGVNMPARCVVFDSI RKHDGTGFRDLLPSEYIQMAGRAGRRGLDTTGTVIVLCKNDVPEMGDLHRMMLGKPTKLE SQFKLTYSMILNILRVERMSVEDMMKRSFSEAITYKNQSQYQAELELYTEQLKQEPEFNC MMCKNIEQYYAAAKEYVEQRANVFNLIHGFPGVVKAVAPGRILLICYEQYQSYLACVLKI DAKDKTKMIVFVLKEKSQKNYSKHELMAKESLSASEAMFEPLEEPSEHGFLEITFKHIAA ITNRLVKIDGDKVIDNIKKRQIPRFKDDPPSQSVMELLKEMQRLNESGGENLKCLDLLND LGIREIAAVSNIHRMNLLKKKAVEMPCLDCTQFREHFNMMYKKLHLREEIGRLKFLMSEE ALQLHPEYQMRIQVLKTLGYIEENNTVTLKGRVACEMGNHELMITELVLENVFAESPVEI ISGLLSSLVFQDRNSSDPELTPELLKGVQQFKNVAKRIGEVQKECGLKEAVGDYVDQFNF GLTEVVYQWAKGMAFKKIMELTDVQEGITVKCIQRLNEVLKDVRNAARIIGDPSLMQKME EASTAIKRDIVFTPSLYTQ NT seq 3660 nt NT seq  +upstreamnt  +downstreamnt atggggagcctttcgtggctgcctgcgggccttcctcctgtcctgcccaccctcaaagag cagattgaggagtacctcctaatgcctgaggagctgcccatccacgcccccatccattcc cggcggtggttcccaagaacgcctagcccaagacgcctctacaggctcacactctttccc gtaacatcatgcctagaggtggaacgtgaccctgccacgggccatatcacaggagtacgt gaggtgtctaacagtgatgcaggagccactgccaagaactccatgtcaatgcgtcgtgcc ccaggacccccagaggagatggtgagggggtcatcaaccaacttgcccttctggcctgga ggcttcccagagcctacactggacaaggagtccacagagggggagcacgagctggacttg accaacctggtgaccaaacatcccaggctgtcacggggtatcacctttgaggagcctgag ccaccaccccaggagccccaatcccaagaggaaaccaaggaaccagaggagaaaaagagc tctgacctggtggtcagcatctcagacatgctgatggtggacgagagtgtgctcaagatc tttgacgtgaaggaggagcaaaccaagaagccagctacactcaccctggaggacctgaac gaggaggactctaacctcatccagaccttcaagatcgagccagctcccaagaaggaggag tttgtcctcaacatcagtgaagtcccagtggaagtggagctctctgggcctagtactgag tgggccgagaaggtcgatgttcacgcgcctgtcgacgacttccacactcgtgtccctaat cctgcctgtacttatcccttcgagcttgacatattccagaagcaagcaattttgcattta gagaatagagagagtgtctttgtagctgctcacacttcagccggtaaaacggtggtggct gagtatgcaattgctctcacccttaaacacatgacgagggctatttatacctcaccaatc aaggccttatcgaatcagaaatacagagatttaaaaataaagtttgaagatgtaggtttg ttaacaggtgatatacagattaatcccaaggcctcgtgtttgattatgacaacagaaatc ttacaatctatgctttataatggtagtgacttgattcgagacttagagtgggttattttc gatgaggttcactacatcaacaatgcagagagaggccatgtatgggaggaagttctaatc atgcttcccgagagagtgagcattgtactattgtctgcaactgttcccaacaccattgaa tttgctgactggattgggagaattaagaagaggaagatctatgtaattagcaccacaaaa cgacctgtgcccctggagcacttcctctacacaggaatgggtggcaagagtaaggatgag cggttccttttgattgatgctcaagggaagtttgtaaccaagggatacaataatgccctc gcagctaagaatgaaaagaagagcaagatgcagcagcagcagcatggacctaagcacatg aggcagcacatgggggagaagcaggagaagaacatgtggattggcctcattgaccatctg agcaagcgagaactcctgcccatcgtggcgtttacactgtccaagaagaggtgtgacagc aatgccagtcagctgctgagtcaggacctgactaccagtgcagaaaagggtgagatccat tccttcatcaagaggtgcacggagaggctgcaaggcgctgatcgagagttgccacaggtt gtctacatgcaggaactcctcactaaaggtattggtgttcatcacagtgggattttgccc attttgaaagaggttgtggagatgctctttgctaagggtctagtgaagctgctgtttgcc acagagacctttgccatgggtgtcaacatgcctgcgaggtgtgttgtgtttgactcaatc cgtaaacatgatggaactggcttcagagacttgcttcctagtgaatacattcaaatggct ggccgtgctggtcgcagaggtctcgacacaacaggaactgtaattgttctatgtaagaat gatgttcctgaaatgggtgaccttcaccgcatgatgttaggcaaaccaacgaagttggag tcgcagttcaagctcacttattcaatgatccttaacattttacgtgtggagagaatgagt gttgaagatatgatgaagcggtccttctctgaagccatcacttacaaaaaccaaagtcaa tatcaggccgagcttgaactctacactgaacagctgaagcaagaacctgagttcaactgt atgatgtgtaagaatatagaacagtattatgcagcagccaaagagtatgtggagcagcgt gctaatgtcttcaacttgattcacggttttccaggtgtagttaaggcagtggcacctgga agaattttacttatatgctatgaacaatatcaatcatatcttgcatgtgttctgaaaatc gatgctaaagataagaccaagatgattgtgttcgtgttgaaggagaagtctcaaaagaat tactcaaagcatgaacttatggcaaaggagtctctaagtgcctcagaagcaatgtttgag cctttggaggaaccttcagagcatggttttctggagataactttcaagcacattgctgca ataacaaatcggttggtgaagatagatggcgataaagtcattgacaatatcaagaaaagg cagatcccaagattcaaggatgacccaccatcacaatctgttatggagttgctcaaggag atgcaaaggttgaacgagtcaggaggtgagaatttgaaatgtttggacttgctgaatgac ctaggaatccgagaaatagcagctgttagtaatattcacagaatgaatcttttgaagaag aaggctgtagagatgccatgcttggactgcacacaattcagggagcacttcaatatgatg tacaagaagctgcacctgcgagaggagattggacgcttgaagttcctaatgtctgaagag gcactgcagttacatccagagtaccagatgaggatccaagtgctcaagacgcttggctac attgaggagaacaataccgtcacactcaagggccgtgtggcctgtgagatgggcaaccat gagctcatgattacagaactggtgctggaaaatgtgtttgcagaaagtcctgtggaaata atctctggcctcctgtcaagtttagttttccaggacaggaacagcagtgaccctgagctc acgcctgagctcctgaagggtgtccagcagttcaagaatgttgccaaacgcattggtgag gtacagaaggagtgtggactgaaggaagctgtgggtgattatgtggaccagttcaatttt ggtctcacagaggtggtgtaccagtgggctaagggcatggccttcaagaagatcatggaa ctcacagatgtccaggagggtatcacagtaaagtgcattcagcgcctgaacgaggtcctg aaggacgtgcgaaatgcagccagaatcattggtgatccaagtctcatgcagaaaatggaa gaggcttcaacagccatcaagagggacattgttttcacaccaagtttgtatacacaataa

DBGET integrated database retrieval system