Penaeus japonicus (kuruma prawn): 122251636
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Entry
122251636 CDS
T07703
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03013
Nucleocytoplasmic transport
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122251636
09122 Translation
03013 Nucleocytoplasmic transport
122251636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122251636
03041 Spliceosome [BR:
pja03041
]
122251636
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122251636
Spliceosome [BR:
pja03041
]
Complex C
Other components
EJC/TREX
122251636
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122251636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
122251636
NCBI-ProteinID:
XP_042869618
LinkDB
All DBs
Position
Unknown
AA seq
1483 aa
AA seq
DB search
MAGSHRLFTLETWKNWAKSGKAEVIQTIKQLLKEDPDNPGLSQPDVSKDLSRGLYEILSA
VLRGNLTREHVRPLLAEMLNWHPDMASQLVEVATLLDLEASTIDRLGRNREQLMMLLKSL
DIDKMMKERLEIETLGDYGIVKNKKNFHTKQIKVKTKLFYKQQKFNLLREETEGYAKLVT
ELNQDITERVTPQSIIQVIRSLIGGFNLDPNRVLDLILESLEARPSQHQFYTGLLNQYPC
ESATISELLGFKLNNHASNAKDAKGIYTTIALLIQANILQLSDIYSWLTPEDSSMIECHL
KEESEAKEIVRKLNVISTKDKDKEKEKEQERQEEESVKEDFKNQEVYLSNQKIQLCIALI
EVGAWEHFVEISSRFPDYYLMSFPPVSQALCQLVHATIEPIYRKVCNLPSRLKASPVKPL
DNPLAPQPAESFGDVCSTVFPMLIVLGPHLFHDPGLMCKVLRVARVALKEAPGGEDGVRS
NFYFEFLSVLDEVLLPSLSMLDSNPCLAEEIWETLKMYPYQHRYRLYGRWKNESFTQHPM
LMRRRALLLKKAKFIMMRITKETIKPVSRGIGKLTHNNPGPIFHYILIQVQLYDNLIGPV
VDSFKYLTSLSYDMLGYCIVEILSENKDRTAHEEMIISPWLQSLSSFCGTVFKKYVTDLG
GILQFVANQVKSEKSIDLLILREIVQKMGGTDTLEDLTSEQLNAMCGGELLRREAGQYQQ
ERNTKRSSLRLKEALLENDLAIPLLLLMAQQRSSIVYNQTESPHLKLVGKLYDQCQDTMV
QFGSYLFQVVTIEELNDRLPSIGSLLSDYHINADVAFFLARPLFINMLNSRYDELRRQDR
GEKKLTIEQKKDRYIQACNEVFEPIVSSIQPHFSIKVWEDMDPSFFLTFWTLTMSDLEVP
HYMYEKEIKKIDANVSPSANKRKKETDRLLALKEKLQEEEKRQKEHVDRVYARLQQEKDG
WFMLRGARSPKNDTVTAFLQLCLFPRCTFTALDAIYCAKFVKMLHNLKTPNFSTLICYDR
MYCDITYTVASCTEQEAHRYGRFLLGTLDTVMHWHASQQNYEKECANYPGFVTKYRVSRQ
EANDYVDYENYRHVVHKWHYKITKALVTCLESGDYIQIRNAILILQGILQRFPVISNLAA
VIEKRIEKVKNEERNRRNDLYVLANSYSGRLKAAKPNLMPETDFHIVPKRPQASKVVNGA
SEKSSSTTTNDVKSSGEVVEHNEKIVKMETSEATNGELEAKEDRDPKESKKESASKVSKE
KKETSDKRRSEEREIKKEEKEKKDKEKKEEREEKPKKRSKESKKSKYEDEDYVDPERDDR
ALVGGGAERERESSVTSNASSASNKMEPPESSRGSKRRKTEHNSKSRKEEGSRREHKHKE
RSKSKEPEGETQTKESKKEKKERKRDRSQDDAADSDLKRKKEDRIKSNGRSEDDHKHRHQ
THRADSEEYHDRYSSDIRGKDYREYEYERDYEKHPPSRHKRKN
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcagtcaccgcttgtttacactcgagacttggaaaaattgggcaaaatcggga
aaagcagaagttatccaaacaatcaaacaactattaaaagaagacccagataaccctggc
ttatcccaaccagatgttagcaaagacctgtccagaggactgtacgagatattgtcagct
gttttaaggggcaacttgacacgtgaacatgtgcggccacttcttgcagaaatgcttaac
tggcacccagatatggcatcacagctggtggaggtggccacccttcttgacctggaagcc
tccaccatcgaccgcctcggcagaaaccgtgagcagctgatgatgttgctcaagtcctta
gatattgataaaatgatgaaggagaggttggagattgaaacccttggagattatggtatt
gtgaaaaacaagaaaaatttccacacaaaacagataaaagtgaagactaagttattctac
aaacaacagaaattcaaccttttacgagaagaaacagaaggttatgctaaacttgtgacg
gagctcaaccaagatataacagagagagttacgcctcagtcaatcatccaagtcattcgt
agtcttatcggtggtttcaacttggaccccaatcgcgtcttagaccttatcctagagtcc
ttggaggcgcggccatcccaacaccagttctacacagggctcctcaatcagtacccttgt
gagtcagccaccatcagtgagctcctgggcttcaagctcaacaatcacgcctcaaatgcc
aaggacgccaaggggatctacaccaccattgcgctcctcatccaggccaacatcttgcag
ctttctgatatctactcgtggttgacccccgaggattcctccatgatcgagtgccacctg
aaggaagagagcgaggcaaaggagatcgtcagaaaactcaacgtcatatcaaccaaagac
aaggacaaagagaaggagaaggagcaggaaaggcaagaggaggagagtgtgaaggaggat
tttaagaatcaagaggtgtatctgtccaatcaaaagatccagctgtgcattgctctcata
gaggttggagcttgggagcattttgttgaaatttcatcacgttttcctgactattatttg
atgtctttcccacctgtgagtcaagctctttgtcagctggttcatgccacaattgaaccc
atctacagaaaggtgtgcaatttgccaagccgactcaaggcctctccagtcaagccccta
gacaaccctctggccccacaaccagccgagagttttggcgacgtctgctccacagtgttc
cccatgctgattgtgcttggcccacacctcttccatgaccctgggcttatgtgcaaggtc
ctgagggtggctagggtggctctcaaggaggcaccaggaggagaagatggcgtccgttcc
aatttctactttgagtttttaagtgttttggatgaagttctccttccatctctctctatg
ctagactcaaacccatgcctggcagaggagatttgggaaacactcaagatgtatccctat
cagcacagatataggttgtatggcagatggaagaacgagtccttcacgcagcatcctatg
ttgatgaggcgacgtgctctgctgctcaagaaggcaaagttcatcatgatgcgtatcact
aaggaaaccatcaagcctgtgagcagaggcattggaaagctgacgcataacaatccaggc
cccatattccattatatcctgatccaagtacagttgtatgacaacttgattggccctgtg
gtggacagctttaagtacctgacgtctctctcctatgatatgctgggatactgcatcgtg
gaaattctctcagagaacaaggatagaacagcacatgaagagatgatcatctcaccatgg
ctccagtccctctccagtttctgtggtacagtgttcaagaaatatgttacagaccttgga
ggtatcttgcagtttgtggcaaatcaagtcaagtctgaaaagtccattgatctcctcatc
ttaagagaaatagtgcagaaaatgggtggaacggatactttagaagatctcacatccgaa
cagctgaatgccatgtgtggtggagaactcctccgtcgggaagcagggcagtaccaacag
gagaggaataccaagaggtcatctcttcgtttgaaggaggctctcctggagaatgacctt
gccattcctctgttgctgcttatggcacaacagagatcgtctattgtttacaatcagacg
gaatcaccccatttaaaacttgtaggaaagctttatgaccaatgccaggacacaatggtg
cagtttggctcatacctcttccaagtggtcactatagaggaactcaatgatcggctgccc
agcattggttccttgctctctgactaccacatcaatgctgatgttgcattcttcctcgca
cgtccactttttataaatatgctaaattcgaggtatgatgagttaagaaggcaagatcga
ggtgagaagaaactaaccattgaacagaagaaagatcggtatatccaggcttgcaatgaa
gtttttgaacccattgtttccagcatccagccacacttcagtattaaggtctgggaagac
atggatccctccttcttcctcacattctggacactcaccatgtctgacctggaggttccc
cactacatgtacgagaaggagatcaagaagattgatgcaaacgtgagcccatcggcaaac
aagcgtaagaaggagacagaccgtctgctggcactgaaggagaaactccaggaagaggag
aagcgccaaaaggagcatgtagacagagtgtatgccagattacaacaggaaaaagacgga
tggttcatgctgcgaggagcaagatccccaaagaatgacactgtgacagctttccttcaa
ctctgcctgtttccacgatgcactttcacagcactggatgctatctattgtgccaagttt
gtgaagatgctgcacaacctcaagaccccaaatttctctaccttgatatgctatgaccgt
atgtattgtgacatcacctacaccgttgcctcctgcaccgagcaagaggctcaccgatat
ggccggttcctcctggggactttggatacggtcatgcactggcacgcatcacagcagaat
tatgagaaggagtgtgccaactacccaggcttcgtcactaagtaccgggtgtcacgccag
gaagccaacgattatgtggactatgagaactaccgtcacgtcgtccacaagtggcactac
aagatcacaaaagccctggtaacctgcctagaaagtggtgactacattcagatacgcaac
gccatccttattctgcagggcatcttgcaacgcttccctgtcatctcaaacctcgcagca
gtcattgaaaaaaggattgagaaggtgaaaaatgaggagaggaatcgccgaaatgaccta
tacgtcctggcaaacagctactcagggagactaaaagctgctaagcctaacctcatgcca
gaaacagacttccacatcgtccctaagaggccacaggcctcaaaggttgtgaacggggcc
tctgagaagtctagctcgacaaccacaaatgatgtcaagagcagtggggaggtggtagag
cacaatgaaaagattgtcaagatggagacgtcagaggccaccaatggagagctggaggcc
aaggaggaccgggaccccaaggagagcaagaaagagtcagcaagcaaagtgtccaaggag
aaaaaagagaccagtgataagagaaggagtgaagaaagagagataaagaaggaggagaag
gaaaagaaggacaaggagaagaaagaggaacgggaagagaagcccaaaaagagatctaaa
gaatccaagaaatccaagtatgaagacgaggactatgtggacccagagcgagatgaccgg
gcattagtggggggcggagccgagagggagagggagagcagtgtcacgtccaacgcttca
tcggcctctaacaagatggaaccacctgagtcttcaagagggtcaaagcgacgcaagact
gaacataactccaagagccgcaaggaggaaggttcgcggcgagagcacaagcacaaggag
cggtccaagtcgaaggaacccgaaggagagacacagaccaaagagagcaagaaggagaag
aaggagaggaagagggaccgatcacaagatgacgcagcggattctgatttgaaaaggaag
aaggaggaccgaataaaaagtaatggcaggtcggaggacgaccacaaacacaggcaccaa
acacacagggcggacagcgaagagtatcacgaccgatattcaagtgacatcagagggaag
gattaccgagaatacgaatacgagcgagattacgagaagcatccaccaagcagacacaag
cgtaaaaactaa
DBGET
integrated database retrieval system
