Penaeus japonicus (kuruma prawn): 122251975
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Entry
122251975 CDS
T07703
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03430
Mismatch repair
pja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122251975
03460 Fanconi anemia pathway
122251975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pja03400
]
122251975
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122251975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Tab2-like_N
Motif
Other DBs
NCBI-GeneID:
122251975
NCBI-ProteinID:
XP_042870177
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MDELEGVDLIESNGEAVPTTQAAKSIKAIDRTTVHKICSGQVVLTLGTAVKELVENGIDA
GATSIEIRLRDHGVSMVEVVDNGKGVEENDFEGLTLKHHTSKIQDFGDLVGVKTFGFRGE
ALSSLCALSDLMVVTRHESQSVGTKLVYNHNGKLISKTPCPRQVGTTVTLQNLFSTLPVR
HKEFQRNIKKEFGKMVQVLNSYCLISTGVRISCTNQSDKGKKSVVLSTNGHPTIKENISS
VFGAKQVSSLLEFKQETASDDILSEYGMQCSSEDVKGKTLFTLEGFISSCEHGQGRSASD
RQFYFINSRPCDPAKVTKVVNEVYHQYNRYQYPCVVLNIRLKEDDVDINVTPDKRQILVN
NEKLLLATIKTSMIRLYGNIPNSFKMQNTSLSNSFSSSQNTPSRPSPSAGSPSSGRISAL
SQRFGRKSEGSPLSNMSPSQSSSPLSAFSLKRSFSNSSCAEESPSNKQPKLESFLAKCKS
DPGENSVKSMKFEEEGNDLHSDSTLLEKDEIVTNGEKNHSNMNGLIKEESEDVEGERTMI
KSESIESDEKIVPSDAIDRPREISIKTEDEQMEMLLLRASELVNGDRDEPEESEEIDSTQ
KSNDFANNNNNEKDSLQTNDRVTQFSSSSKEPGVKNVLSQFSRSASVTSQSCQKAHSATD
NFLSNLLAKKSQNKYVKESSLPSANEYRQNAVDVSEPDDEGICDSASFEETWEEDFYEDS
VPKEEKTKEIIVCEEYDPSDFTANRKSRAIEFDIEDIRKKLSLTTEEEKPGELVRKFRAK
IAPGENTSAEDELRKEISKDMFAKMEILGQFNLGFIIARLGSDLFIIDQHATDEKYNFET
LQATCTIQNQRLIAPQQLELTAANETVLLDNLEIFLKNGFEFKIDEEKPMGQRVSLISMP
HSKGWEFGRDDIDELIFMLSDAPGVMCRPTRVRAMFASRACRKSIMIGTALTKAQMQKLV
CHMGEINQPWNCPHGRPTMRHLINLDMVTAPR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattggaaggagtcgacttaattgaaagcaatggggaagcagttccaactact
caggcagctaagtctatcaaagcaatagacagaacaacagttcataagatatgctcaggc
caggtcgttttaacacttggaacagctgtcaaagaacttgtggaaaatggtatagatgct
ggagctacgagcattgaaattcgcctacgagatcatggtgtttccatggtcgaagttgtt
gataatggaaagggcgtggaggagaatgacttcgaggggctgactttaaaacatcatacc
tcgaagatacaagattttggggacttggttggagtgaaaacctttgggtttcggggtgaa
gccctcagttccctgtgtgccctcagtgacctcatggtagtgacaaggcacgaaagtcag
tcagttggcaccaaacttgtttataatcataatggcaaacttatcagcaaaactccttgc
cctaggcaggtaggtacaacagtcactctccaaaacttgttctcaaccttgccggtgaga
cacaaggaattccagcgcaacatcaagaaagagtttggcaagatggtgcaggtcctgaat
tcatattgcctaatatccactggagttaggatatcatgtacaaatcagagtgataagggc
aagaaatcagttgttctgtcaacgaatgggcatccaacaattaaagaaaacatctcctca
gtatttggagccaaacaggtttcaagccttttggaattcaagcaagaaacagcttcagat
gatattttgtctgaatatgggatgcagtgctctagtgaagatgtcaaaggaaagacacta
ttcaccctggaggggttcatctcttcttgcgagcatggacagggacgttcagcttccgat
cgccagttctattttatcaactctcgtccatgtgaccctgcaaaagtcaccaaggtagtg
aatgaggtgtatcatcaatataaccgctaccagtatccttgtgttgtgctcaacatacgt
ttgaaagaagatgatgtggacatcaatgtgaccccagacaagaggcaaattttagttaac
aatgagaagcttttgcttgcaacaatcaagacctcaatgattcgtctctatggaaacata
cccaattccttcaaaatgcagaacacatctctcagtaactctttctcatcatcacaaaat
actccatcaagaccaagccccagtgcaggtagtccttccagtggtaggatctcagcactg
agccagaggtttggtcgcaaatctgaaggatctccattgtcaaacatgtctccttcacaa
tcctcatctccactatcagcatttagcctcaagagaagcttttccaacagttcttgtgca
gaggaaagcccaagtaataaacaaccaaaactagaatctttcctggcaaagtgcaagtct
gatcctggagaaaattctgttaagagcatgaaatttgaagaagaaggcaatgacttgcac
tcagattccactttgttggagaaagatgagatcgttacaaatggagaaaagaaccattca
aacatgaatggcttaataaaagaagagtctgaagacgtggaaggtgaaagaaccatgatc
aaaagtgagagtattgaatctgatgagaaaatcgtaccatcagatgctatagataggcca
agagaaatttcaataaaaactgaagatgagcaaatggaaatgttattgctacgggcatca
gagcttgtgaatggagacagagatgaaccagaagaaagtgaggagatagacagcacccag
aagagcaatgattttgcaaacaataataacaatgaaaaagattctttgcagaccaatgat
agagttactcaattttccagttcttcaaaagaacctggggtaaagaatgttctttctcaa
ttttctaggtcagcttcagtaacatctcaaagttgtcagaaggcacatagtgctacagat
aatttcttaagtaatcttttggcaaagaaatcacagaacaaatatgtgaaagaatccagc
ttgccatctgccaatgaatacagacaaaatgcagtggatgtaagtgaaccagatgatgag
ggtatatgtgacagcgcaagctttgaagagacctgggaggaggatttttatgaagatagt
gtaccaaaagaggagaaaacaaaagagattattgtgtgtgaagaatatgatccaagtgac
tttacagctaatagaaaatctagagctattgaatttgatattgaggacattagaaaaaaa
ttaagcttaactactgaagaagaaaaacctggagaactagtcagaaagttcagagccaag
attgctccaggtgaaaatacatcagcagaagatgagctgaggaaagaaatctcaaaagac
atgtttgcaaagatggaaattttgggtcagttcaatttgggattcatcatcgctcgtctt
ggctctgacctgttcataattgaccagcatgcaactgatgagaagtacaactttgaaact
ctccaagcaacttgcacaattcagaaccagaggctgattgccccacagcagctagaactg
acagcagccaatgaaactgtcttgttagataacttggaaatatttctgaaaaatggattt
gagtttaagatcgatgaagagaaaccaatgggacaaagggtgagcctaatatcaatgccc
cacagcaaaggctgggagttcggacgtgatgatattgatgaattgatattcatgttgtca
gatgctcctggggtgatgtgccgaccaacacgcgtcagggcaatgtttgcttcaagagct
tgccgcaagtccattatgattggcacagcactgactaaggcacaaatgcaaaagctggta
tgccatatgggtgagattaatcaaccatggaattgtccgcatggtcgaccaacaatgagg
cacttaataaaccttgatatggtgactgcacccagatga
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