Penaeus japonicus (kuruma prawn): 122252379
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Entry
122252379 CDS
T07703
Name
(RefSeq) general transcription factor IIH subunit 1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03022
Basal transcription factors
pja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122252379
09124 Replication and repair
03420 Nucleotide excision repair
122252379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122252379
03400 DNA repair and recombination proteins [BR:
pja03400
]
122252379
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122252379
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122252379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
122252379
NCBI-ProteinID:
XP_042870761
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSGEREDILLQVNHVRYKKNNGQLYLSQTRVGWMMEESDTFTVSVVYNDIRTQKISPEGK
PKVQLQIVLHDISSHTFQFCNPEGRDKQVVERNLVKERLSQLMNQNKRQPPDELMQKKRM
LDENEQLQQLYRALVPTAIISVEEFWKEIASQYKQTMGPQQDVGVSGAFLADIKPQTDGN
NGKVQYNLTPEIMAAVFKTYPTVKKKHSDYVPHRMSESEFWTRFFQSHYYSVHTTSRSEN
VFSECAKSDDKEWNRDVNSIQNDPLYDLNDIYDGERVHSIESDLKVAGPKAGSNIIHATM
IKRFNQHSLNILKAQNYSEKEKIMDEIAAKNPNGIPNGDANQEPDLQLHKNKKVRIEEKL
AYEDLENKTNTEITSLTIHQKDRYLTGPTEDTTTHGLPPRQVLALQDQLRLAVDNWNPNL
HGSQDSDLAYRTLQCFSEQSRRSRNSGGIHGDHLPGNLHKELTQVYSSAGELLRHFWSCF
PPRTPQLQEKLHKMHETLCKYHTVTIRPFHEMAVNDYNCNSTILDHLIGMFSIANTKFEN
WKARNTR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagagagagaggacatcttactccaggtgaatcatgtgcgctacaagaagaac
aatggacagctctacctgtcccagacacgcgtgggatggatgatggaggagtctgacact
ttcaccgtcagcgttgtgtacaatgacatcagaacgcaaaaaatatctccggaggggaag
ccaaaagtccagcttcaaattgtcctccatgacatttcgtcccacacattccagttttgc
aatccagagggacgagacaagcaagttgttgaaagaaacctggttaaggaacgcctcagt
cagctgatgaaccagaataaacgacagcctccagatgaattgatgcaaaagaaacgtatg
ttggatgagaacgaacaacttcagcaactgtatagagcgctggtacccacagctatcatc
tcagtggaggagttttggaaagagattgcgagccagtacaaacaaactatgggaccacaa
caggatgttggagtgtctggagcatttttggctgacataaaacctcagaccgacgggaat
aatggaaaagtccagtataatttaaccccagagatcatggctgctgtgttcaagacatac
cccacagtcaaaaagaaacactcagattatgtcccacacagaatgtctgaatctgaattt
tggacccgattctttcagtcccactactacagtgtccacaccactagtcgcagtgaaaat
gtattttctgagtgtgcaaaatctgatgataaagaatggaatagagatgtgaactcaata
caaaatgacccactgtatgatctgaatgacatttatgatggagagagagtccactctatt
gaaagtgatctgaaagtcgccggacctaaagcggggagtaatataattcatgctaccatg
atcaaaagatttaaccagcacagcctcaacattcttaaagcacaaaattattccgaaaaa
gaaaaaataatggatgagatagcggcaaaaaaccctaatggtatcccaaatggtgatgca
aatcaggaaccagatcttcagttacacaagaataaaaaggtcagaatagaagagaaatta
gcatatgaagacttggagaacaaaaccaatacagagattacttcactcaccattcaccag
aaagaccgatatctcacaggcccaactgaggacacaacaacgcatggtttaccgcctcga
caggttttggctctacaggatcaattaagattagcggttgacaactggaacccaaacttg
cacgggagtcaagattcagacttggcatacaggactctacagtgcttcagtgaacagagc
cggaggagtcgaaacagtggtggcattcatggagatcacttaccgggaaacttacacaag
gagctcacccaagtgtacagcagcgctggggaactcctacgtcacttctggtcgtgcttc
ccccctagaacgccgcagctgcaagagaagctgcacaagatgcatgaaaccctttgcaaa
taccatactgtcaccataagaccattccatgaaatggcagtaaatgattataactgcaac
tcaaccatcttggaccacctgataggcatgttcagcattgccaatacaaagtttgaaaat
tggaaggcgcggaacaccaggtga
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