Penaeus japonicus (kuruma prawn): 122253193
Help
Entry
122253193 CDS
T07703
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03013
Nucleocytoplasmic transport
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122253193
09122 Translation
03013 Nucleocytoplasmic transport
122253193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122253193
03041 Spliceosome [BR:
pja03041
]
122253193
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
122253193
Spliceosome [BR:
pja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122253193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
122253193
NCBI-ProteinID:
XP_042871993
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MGRGDKESEANTRESKRRRKTAVEVSLSHPLSLEMSKKAVTSSGSEGEVPETQAATRTPK
EKDSLKTITDTYQASLEHECQEARQRTEEEDQETVAKITQHIRSLMKEILKLKTEKPDQW
SSEVEDRRVQVLMLILSLRRLSRVQKVRVRDARDKTAEARQSVDGVTLQLQNLLYEVAHL
KKEVRRCLEFQSADQEIDLVPVEQFYIEAPESISRPTETVDKPHEQRLARLQWELEQRRG
QTQLFDKLTQEKESVADMISEQERKLASLAPRINSILEATRPLQEALDLPLDAKREQQRI
VQLLPSPLYTLWVQASAYGEAFDPNIKVEVNGDVEAAKKLITKEEDSRTENFTDSENDQD
QQEENLSRKKRTRKSQKMDTDDVDDGVKQILALHPLSVKICVNTKDGNSVVITFNHMQVL
RIVTVKCSVHLQEKNKSVLSDVISGDTLLNCLFPNDDGEESPNPANFFQLIRLQIQLKDH
LASTGRPYKWAQNLSGLSFSTSEQTISEEGQDKAGNSAMTTIPPVENEVVVWQDSAEHMQ
NTIQAIRRRLQARLALHSQLVNLETANSTSSIAVPADLLCQHFPGKVCTEFKSWRSLTWS
EYKAAPTTQLLREYGVVTQQHLLFIAVFERKHVHLEALVAISPDHPNTVPVFSLSVHWEG
HHQATNNPQLRQMEKEVNVHWDELVSTRNEQLHLLPLLLYRLAVCLDVFTEAYSAHADAH
KPDSQFHKEKIFFRPARGPDRAFPFKYHPKLGVFSQR
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaggagacaaggaaagtgaggcgaacacgcgagagtcaaagcgtcgccggaaa
actgcagtggaagtgtccctttcgcaccctttgtccttagagatgtccaaaaaagcggtc
acttcgtctggcagcgaaggggaagtcccagagacccaggcggccaccaggacacccaag
gaaaaggacagtttgaagactatcaccgatacctatcaggctagcttagagcatgagtgt
caagaagctcgacagaggacagaagaggaggaccaggagactgtggccaagatcacccaa
cacattcgctccctcatgaaagagatcctcaaactaaaaacagaaaagcccgaccagtgg
tcaagtgaagtggaagatcggcgtgtgcaggtccttatgttaatcttgtctttacggcgc
ttgagcagggtgcaaaaggtgcgtgttcgtgatgctcgtgacaagacagctgaagcacgt
caaagtgtggatggtgttaccctccagttgcagaacctgctgtatgaggtcgctcacctg
aaaaaggaagtgagacgctgtctggaattccagtcggcagaccaggaaatcgacttggtt
cctgtggaacaattttacattgaagcccctgagtccatcagccgcccaacagagactgtg
gacaagccccatgagcaaaggctagcacgtttgcaatgggaactagagcagcggcgtggc
cagacccagctctttgataagttgactcaggagaaggagtctgttgctgacatgataagt
gagcaggaacgaaaattggcatctttggcacccagaattaatagtattttggaggcaaca
cgaccacttcaagaagctcttgacttgcctttggatgctaagagggaacagcagagaata
gttcagttgcttccaagtcctctgtacacactttgggtccaggcatcagcatatggcgaa
gcattcgacccaaacattaaggtggaagtgaatggggatgtagaagctgccaagaaactc
attacgaaggaggaggattcaagaacagagaacttcactgattctgagaatgaccaggac
cagcaggaagaaaacttgtctcgcaagaagagaactcgtaaatcacagaagatggacaca
gatgatgtggatgatggagtcaaacagattctcgctttacacccactgtcagttaaaatt
tgtgtcaacaccaaagatggcaacagtgtggtcattacatttaatcatatgcaagttctg
cggatagtaacagtcaagtgctctgtccacctacaagaaaagaacaagtcagtgctatca
gatgtaattagtggtgacacactcctgaattgcctgtttcctaatgatgatggagaggag
tcgccaaatcctgccaacttcttccagctcatccgcctccagatccagctaaaagaccac
ctggcatccacaggacgtccttacaagtgggcacagaatctctctggcttgtcattctct
acaagtgagcagaccatctcagaagagggacaagacaaggctggaaattcagcaatgact
acaatcccaccagtagaaaatgaagttgttgtctggcaagatagtgctgaacacatgcaa
aacactattcaggctattcgtcgtagattgcaggctcggctagcattgcactcacagtta
gtgaatctagaaacggccaactccacaagctccattgcagttccagcagaccttttatgt
caacattttccgggtaaggtctgcacagaattcaaatcttggcgatcactcacatggtca
gaatataaggctgcacctacaacacagttgctgcgagaatatggtgtggtcacccaacag
catctgttgttcatagcagtttttgaacgtaaacatgtccacctggaggctcttgtcgcc
atttcccctgatcacccgaacacggtgccagtcttctccctctctgtgcattgggaaggg
catcatcaagccaccaataatccacagctcagacaaatggagaaggaagtcaacgttcac
tgggatgaactggtttccactagaaatgaacagctccacctcctgcctctgcttctgtac
cgcttggcagtgtgtctggatgtgtttactgaggcttacagtgctcatgcagatgctcac
aagcccgactcccagtttcacaaggaaaagatcttcttcagacctgctaggggacctgac
cgagcatttcctttcaagtatcatccaaagcttggagtgttctcacagcgctaa
DBGET
integrated database retrieval system