Penaeus japonicus (kuruma prawn): 122253618
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Entry
122253618 CDS
T07703
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122253618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122253618
03009 Ribosome biogenesis [BR:
pja03009
]
122253618
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122253618
Spliceosome [BR:
pja03041
]
Complex A
U1 snRNP components
U1 related factors
122253618
Complex B
122253618
Ribosome biogenesis [BR:
pja03009
]
Eukaryotic type
Pre-60S particles
Helicases
122253618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
HisK-N-like
Motif
Other DBs
NCBI-GeneID:
122253618
NCBI-ProteinID:
XP_042872802
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MSYRSSRRSRSRSRSRSRDRGRRDRDDWGRGGGYGGSGGGGRPSLKGRQPGERLRKPKWD
LSRLAPFEKNFYQPTPVVVNRQPYEVEQYRNEKEITLRGKNIPNPIQYFTDYNFPDYVMA
EIRRQGYEAPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLERGDG
PIALILAPTRELAQQILTVAQDFGSSSKIRSTCVFGGAPKGPQIRDLERGVEICIATPGR
LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR
NLAEDFLKEYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKLRQLLEEIMAEKESKIIVF
AETKRKVDDLTRRMRREGLRQLLNEMAQERAYKTIIFIETKRKVEDVTRGLRSTGWPAMC
IHGDKSQQERDWVLSEFRSGRAPILVATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIG
RTGRSDKTGTAYTFFTADNCKQAKDLIEVLKEANQVVNPRLYEIMEMGRGGGGKGRNRWR
GRDDDRRGGFGRDRDRSRPSGGRNGYTNGNGYAY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagaagcagccgcaggtctcgctcccgttctcgttctcgctctcgcgaccgt
ggtcgacgcgatagggatgactggggccgaggtggagggtatggtggcagcggtggaggt
gggaggccgtcgctgaaggggaggcagccgggagaacgtctgcgaaagccaaagtgggac
ctgtccagacttgcccccttcgagaagaacttttaccagcccacacctgttgttgtcaac
cgacagccctatgaagtggaacagtacagaaatgaaaaggaaatcacacttagaggaaag
aacattcccaatcccattcagtacttcacggactacaatttcccagactatgtaatggcc
gaaatccgtcgacagggctatgaagcacctacacctattcaggcacaaggctggcctatt
tcattacaaggaagggactttgttggtattgcacagactggctcaggaaagaccttgggt
tacattttaccagccattgttcacatcaaccaccaaccatatttggaacggggagatggc
ccaattgcgcttatcttggctcccacaagagaactcgcccagcaaatcctaacagttgca
caagactttggttcatcttcaaagatccgctccacatgtgtgtttggtggtgcacccaaa
gggccacagattcgtgacttggaacgaggggttgagatttgcattgccacaccaggacgt
ctcattgatttcttagaagcagggaaaaccaatcttcgccgttgtacatatttagtactt
gatgaagctgaccgcatgttggacatgggttttgaaccacaaatcagaaaaattgtagaa
cagattcggcctgaccgacaaactcttatgtggtctgcaacttggcccaaagaggtgagg
aatcttgccgaggacttcttaaaagaatacattcaacttaatgtaggctccctatccctc
gcagccaaccacaacatcctccagattgtagatgtttgccaagagatggaaaaggataca
aaactccggcagctacttgaagagatcatggcagaaaaggaaagcaagatcatcgtgttt
gcagaaacaaaaagaaaagtggacgatttgaccaggcgaatgagacgcgaagggctgcgc
cagttgctcaatgagatggcgcaagagagggcttacaagacaataatctttatcgaaacg
aagcggaaggtggaggatgttactcgtgggttgaggagtactgggtggccagctatgtgt
atccatggagacaaatctcaacaagagagagattgggttttaagtgaattccgttcaggg
agggcaccaatcttggtagccacagacgttgccgctcgtgggttagatgtggatgatgtg
aagttcgtgatcaactacgactacccatcttgctctgaggattacgttcaccgaattggg
cgaactgggcgctcggacaagacaggaactgcctacacattcttcacagcggacaactgt
aagcaggcaaaggatctgatcgaagtgctgaaggaggccaatcaagttgttaatccccgg
ttatatgaaatcatggaaatgggacgcggtggtggaggtaaaggccgcaaccgctggagg
ggacgtgacgatgacaggaggggtggttttggacgtgaccgcgaccgcagccgtccgagt
ggcggacggaacggctacaccaacggaaatggatatgcctactga
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