Penaeus japonicus (kuruma prawn): 122253638
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Entry
122253638 CDS
T07703
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03410
Base excision repair
pja04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122253638
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122253638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pja03036
]
122253638
03400 DNA repair and recombination proteins [BR:
pja03400
]
122253638
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pja04147
]
122253638
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122253638
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122253638
MMR (mismatch excision repair)
Other MMR factors
122253638
Exosome [BR:
pja04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122253638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
COX4
YABBY
DUF3974
Motif
Other DBs
NCBI-GeneID:
122253638
NCBI-ProteinID:
XP_042872849
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MPRGRPRGVAAEKPRGRMTAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKTMSDK
EKKKFHDLAEEDKKRYDEEMKDFVPSPGAGRRGRRARGRRPKDPNKPKRALSAFFYYAND
ERPKVRAANPDFSVGEVAKELGRQWNELTEDDKVKYEKLAEEDRARYDREMTAYKFGGAS
PQKKMKASNGHPVDADPEDDDDDDGEVGGEDDDDDVSDEGSDDE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtggaagacccagaggagttgcagccgagaagcctcgtggccgcatgacggcc
tatgcctttttcgtgcagacttgccgtacagaacacaagaaacttcatcccgacgagaat
gtgcagttcgcagaattctcgcgccagtgctccgagcgctggaagacgatgtccgacaag
gagaagaagaaattccacgacttggcggaggaagacaagaagcggtacgatgaggagatg
aaggacttcgtgccctcgccgggcgcggggcggcgaggacggcgcgcgcggggaagaaga
cccaaggaccccaacaagcccaaacgcgccctgtcggccttcttctactatgccaacgac
gagaggccgaaggtgcgggcggccaaccccgatttctccgtgggcgaggtagcgaaggag
ctcggccgacagtggaacgagctcaccgaggacgacaaagtcaagtacgaaaagctggcg
gaggaggaccgcgcccgctacgaccgcgagatgacggcgtacaagttcggcggcgcgtcc
ccgcagaagaagatgaaggcaagcaatggacatcctgtagatgcagaccccgaggacgac
gacgacgacgacggcgaagtaggcggcgaggatgacgacgacgacgtgtctgacgaaggg
tcagatgacgagtga
DBGET
integrated database retrieval system
