KEGG   Penaeus japonicus (kuruma prawn): 122253712
Entry
122253712         CDS       T07703                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pja  Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:pja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pja03041]
    122253712
Spliceosome [BR:pja03041]
 Complex B
  Other components
   Complex B specific factors
    122253712
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_NWD2_C Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_EIPR1 Mala_s_1-like Beta-prop_BBS7 PROPPIN VPS8_N Beta-prop_LRRK2 VPS11_N Beta-prop_IFT122_2nd LisH_PAC1 DUF7165 WD40_like FlgD_ig
Other DBs
NCBI-GeneID: 122253712
NCBI-ProteinID: XP_042872924
LinkDB
Position
Unknown
AA seq 513 aa
MSIEIESADVIRLIQQYLKENNLTRTLRALQEETSITLNTVDSVESFMADINQGHWDTVL
KAIQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRNTDPLIMLKQTVPERYVHLENL
IARSYFDPREAYPEGVTKERRRAAIAAALAGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTQIDLFRGKAAMREQEEEKVPTQLARFIRFPQKAHVESAHFSPDGQYLVTGSFDGIIEV
WNFTTGKIRKDLKYQEKDSYMMMESAVLSLAFSRDSEMLSAGSQGGQVKVWRVSTGQCLR
KVERAHSEGVTSLAFNKDNSQVLSTSFDNTLRIHGLKSGKTLKEFRGHSSFVNQATFTQD
GHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSVDLPVFSVHILPKNPDHIVVCNRSN
TVTIMNMQGQTVRSLSSGKREGGDFVSCVVSPRGEWIYCVGEDQVLYCFSTSTGKLERTL
NVHEQSVIGMCHHPHQNLLATFSEEGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatagaaattgaatcagccgatgtgatccgattgatccagcagtacttgaaggaa
aataacctgacccgaacactgcgagctcttcaggaagaaacttccatcacactcaacaca
gtggactctgtggagagcttcatggccgatatcaatcagggtcattgggacactgtgctc
aaggcaattcagactttgaaactcccagacaagaagctcattgatttatatgaacaggtt
gttctagaactcattgagctgagggagttgggagctgccaagtcagtgctccgaaataca
gatccacttatcatgttgaagcagaccgtacctgaaaggtatgttcacctggagaacctg
attgcccgttcgtactttgatcctcgagaagcataccctgaaggagtaacaaaggagagg
aggagggcagccatcgccgcagctctggcaggcgaggtgtcagtcgtaccgccatctcgt
ctcttggctctccttggccaggccctcaagtggcaacagcatcagggtcttctgccacct
ggtacccagattgatttgttccgaggtaaggcagccatgagggagcaagaggaggagaaa
gtacccacacagctggcaagatttatccgtttcccacagaaggcacatgtagagagtgcg
cacttcagccctgacggacagtaccttgtcactggcagttttgacggcatcatagaagtg
tggaactttaccacaggtaaaattcgtaaggatttaaagtatcaagaaaaggactcgtac
atgatgatggagtcagctgttctgagtttagcctttagcagagactcagaaatgctttct
gccggctctcagggagggcaagttaaggtgtggcgagtcagtacaggtcagtgcttgcgc
aaggtagagcgtgctcactctgagggtgtgacttccctggccttcaacaaagataacagt
caagttttatccacttcctttgacaacacactcagaatacacggtttaaaatctggaaag
acactaaaagagtttcgtggtcactcttcctttgtcaaccaagccacatttacacaagat
ggacacaacattatcagtgcatcatcagatggcactgtcaaagtctggtctgtcaaaacc
acagaatgtatagcaaccttcaagtcactagctggtgtgacctcggtggatctcccagta
ttctctgtccacatcttgcccaagaacccagatcacatcgtagtgtgtaaccggtctaac
actgtgactatcatgaacatgcagggccagacggtcaggtcattgtcctcaggtaagaga
gagggtggtgactttgtgtcatgtgtcgtgtcacctcgtggagagtggatctattgtgtg
ggtgaagatcaggtgttgtactgcttctccacgtctacaggcaagctagagagaactttg
aatgttcatgaacagtcagttattggaatgtgtcaccatccgcatcagaaccttttggcg
accttcagcgaagaaggtttactcaagctgtggaaaccctaa

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