Penaeus japonicus (kuruma prawn): 122255005
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Entry
122255005 CDS
T07703
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pja03000
]
122255005
Transcription factors [BR:
pja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122255005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Vir1p
Motif
Other DBs
NCBI-GeneID:
122255005
NCBI-ProteinID:
XP_042874863
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MLTLDPPDLKGGSLHSAHLPPHSSHSHSVPHTVSHAHHNSHSHTYSLSHHSSLTSLNSSL
SSSLTSPSLASVGSMSAHSPPQTHVPTPTNNNNSSTNNNNNGSSNNSSSNSTSNSKSNAS
SSSAAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPTDPTRPPVQQVTRDMYNMT
NGYMPNGDYGDYGEWRYGYDSAAYGGQGYPYMTGQVYGGYDMTRGYSPTSTSTPSYMNGS
YSSAMYASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGASMPPS
ASHTTPGDYPTGVMKREYAPGQPGQQDLSQMISMYLPGSQERHEQQKAAAAAAYMSHAHY
HAHAATSPEQMPPAPMPLTHM
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccctcgaccctcctgacctcaagggtgggagcttacactccgcacacctccct
ccccactcctcccactcccattccgttccccacactgtgtcccacgcccaccacaactcc
cactcccacacatactccctgtcccaccattcctcgttgacgtcgctcaattcgtccctc
agctcgtccctgacgagcccctccctggcctccgtgggcagcatgagcgcccactcgccg
ccccagacacacgttccaacccccaccaacaataacaacagcagcacaaacaacaacaac
aacggctcctccaacaacagctccagcaacagcacgagcaacagcaagagcaatgcgtcg
tcctccagcgccgccgccgagcgcgtcaagcggcccatgaacgccttcatggtgtggtcg
agaggccagagacgcaagatggcccaggagaaccccaagatgcacaactcggagatctcg
aagcgcctcggggccgagtggaagctgctgtcggagacggagaagcgcccgttcatcgac
gaggctaaaagactgcgcgccgtccacatgaaggaacatccagactacaagtacagacct
cggcgaaagaccaagaccttgatgaagaaggacaagtacccgctcgcttccggtctgctt
cccactgaccccactcgacccccagtccagcaagtgacccgggacatgtacaatatgacc
aatgggtacatgccgaatggggactatggggattacggtgagtggcgctacgggtacgac
agcgcagcgtacggcggtcagggctatccgtacatgaccggacaagtgtatgggggctac
gacatgacccggggctactcgccgacgtcaactagcacaccctcgtacatgaacgggtcg
tacagttccgctatgtacgcctccgcgccgtcaccctattccatgagccaaatggcttca
atggcttccgtgggttcagtcggttccgtgggttcttcggcgtcccattcacccacgccc
ataaaatcggagacgcccactctccccgtgtcgtctcctggagcctccatgccgccctca
gccagccacaccacaccaggtgattatccaacgggtgtaatgaagcgggagtacgcgccg
ggccagccgggacagcaggacctgtcgcagatgatctccatgtacctgccggggtcccag
gagcgccacgagcagcagaaagccgcagccgccgccgcctacatgtcccacgcccactac
cacgcccacgccgccacttcccccgagcagatgccgcccgcacccatgcctctcacccac
atgtaa
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