Penaeus japonicus (kuruma prawn): 122255348
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Entry
122255348 CDS
T07703
Name
(RefSeq) nucleoporin p54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122255348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122255348
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122255348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Mis12
Motif
Other DBs
NCBI-GeneID:
122255348
NCBI-ProteinID:
XP_042875274
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MACRKGLNASNVKRRHDGSCRKQKTDELKEFSEDLSSCSSDFGFVSTNTGGSTAPSGGGF
TFGAANTGTTTAQGFAFGTATTTGTSTGTTGFSFGGTSTTGTSTAAVSTGFSFGGTKATP
KSTAASTGFTFGNTSTAAAGTGTAGGFSFGAPATSATGGFSFGTTANPTTSASPFGATFG
TTTPASSTATTQGFGFLTNFGGGGGGGGGGGGTSGFPKPATSFGPGTFGGLTNTVPGTGF
SFSGGVNQPAKGFSFGGPVTSNPSGGFGLLGSGFGAKPATAFPVQSSDVSQLQQGALGQP
DPSLALHLAICTPSYFNNENDEVLRKWNQLQAFWGAGKGYYAPNMPPVEFTPENPYCRFK
VVCYARLPDYRNEDGHVQVNIGKPLSEVEQHKQQIVTTLTTLFNGAEVVVEAIYAMKGTN
QTVLHMHVLQPLPNGGKQKAPSSDVYRHMAAPTSAETVKNLCIQDVIPLVSLTEKQMREY
LDTPQRGIDPALWEQGKRENPDPKKFFPVVKVGFQELQMQFKEQEQHAEKLQTSMKEITD
AITQLKHKQAMVKAAIQNAKWKQANLTRRVLKLASAQEVERKRGVPLDQTEEQIRMRLED
LYVQLMQPTQYRGCLNELMAQMSVKPSGSRSCPRYGLVNDKEKDVSQYISWQQEALNAVV
AVLKEDLLIADSMAEELQKKS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccggaaaggcctgaatgctagtaacgtaaagagaaggcatgatggttcttgc
aggaagcagaaaacagatgagctaaaggagttcagtgaggatctttcgagttgttcctct
gattttgggtttgtttcgacgaatacgggaggatcaacagctccgagtggaggcggattc
acttttggggcagctaataccggtacaacaacggctcaaggctttgctttcggaacggcg
acgaccacgggcacgtcgacgggaacgacaggctttagtttcggaggcacgagcaccacg
ggcacaagcactgctgctgtgtctacaggttttagtttcggagggacgaaagccacaccc
aagtcaactgccgcatctacaggtttcacttttggaaacacaagtactgcagcagctgga
acaggaacagcaggtggtttcagcttcggggcaccagccacgagcgccactggaggtttt
agttttggcaccacagccaaccccaccacaagtgcatccccctttggagcgaccttcggc
accaccacaccagcctcatccacagcaacaacgcaagggtttggctttctgactaacttt
ggtggtggtggaggtggtggaggaggtggaggaggcaccagtggcttccccaagccagca
acctcatttgggcctggaacgtttggaggccttacaaacacagtgcctggaacgggcttc
agcttcagtggtggcgtgaaccaaccagccaagggcttcagctttgggggtcctgtgacc
tccaacccctcaggaggcttcggactacttggctcgggattcggagcaaaaccagctact
gccttcccagtacagtcttcagatgtgtcgcaactccaacaaggggcccttgggcaacca
gacccctcactggccctccacctggccatctgcactccctcctacttcaacaatgagaat
gatgaggtcctgcgcaaatggaatcagctgcaagccttttggggtgctggaaaaggctat
tacgcgcccaacatgcccccagtggagttcacgcctgaaaacccttactgtcgcttcaag
gttgtctgctatgcacgccttccagactaccgcaatgaggacggtcacgttcaggtcaac
atcggaaagccgctctcagaagtggagcagcataaacagcagattgtgacaaccctgaca
actctcttcaatggggcagaggtggtggtggaagcaatttatgccatgaaagggacaaat
cagacggtcctgcacatgcacgtcttacaaccacttccaaatggtggaaagcagaaagcg
ccgtcttcagatgtttatcgtcatatggcagctccaactagtgcagagactgttaagaac
ctgtgcatccaggatgtaattccactcgtgtccctgacggaaaagcagatgagggagtac
ctggacactccacagagaggaatcgaccctgcattgtgggagcagggcaagagggagaac
cccgacccaaagaagttcttcccggtggtgaaagtggggttccaggagcttcagatgcag
tttaaagagcaggagcagcacgcagagaagctgcagacaagcatgaaggagatcacagac
gccattacgcagctcaagcacaagcaggccatggtgaaggcggccatccaaaacgccaag
tggaaacaggctaaccttactcggagggtgctcaagctggcgtcagctcaggaagtggaa
cgcaagcgtggagtgccactggaccagacggaggagcagatacgcatgcgtctggaggac
ttgtatgtgcagctcatgcaacccacacaatataggggatgcctgaatgaactcatggcc
cagatgtcagtgaagccctcaggttcgaggagctgcccgcgctacggcttggtgaacgac
aaggagaaggacgtttcacagtacatctcatggcagcaggaggcactcaatgcggtggtc
gcggtgctgaaggaggacctgctgattgcagatagcatggcagaggagctacaaaaaaag
tcttag
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