Penaeus japonicus (kuruma prawn): 122255360
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Entry
122255360 CDS
T07703
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122255360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pja03036
]
122255360
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122255360
REST complex
122255360
Heterochromatin formation proteins
Other heterochromatin formation proteins
122255360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
HHD_RTEL1
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
122255360
NCBI-ProteinID:
XP_042875327
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MVVTGYRKFKIFVSQNPRLQVSVSVPGQQTTVVHTPQGIRHHITPTHHPPPPPPQPVTVK
PPHHPQPPRSALTTGGVTPHTGPSLVGTHSVHNVAGSGSGAGGGGGGSSGSGSGGVGANS
GNTGGGTASVSQVASSVSVGSSTPTGTNSGSSSNATSSSAGGAQHSTNTAPQHPSREPQP
PPPHHHPHHHHQPPAQPVEFNHAINYVNKIKLRFQGQPDIYKQFLEILHTYQKEQRHIKD
GGSIPARTLTETEVYEKVAKLFENQEDLLQEFGQFLPDATNNSAAQAAVSDFMDQYRTHH
GSNKNVSNDHTSVKKPNLKSSCGMGSGNNMVSGPGNPPNKTSPMFSHQLKRPHPGPTQSH
SHGHAHAQPPVKKPKLGYLKDMSAAEAGKHATLAEYAFFDKVRKALRHEETYHNFLRCIT
LYNEEIITRAELVQLVHPFLAKFPDLLKWFKDFVGYREGALGSSDIIPSTVAKQERISGD
LAMEIDYTTCKRLGASYCALPKSYPQPKCSGRTGLCKEVLNDTWVSFPSWSEDSTFVTSR
KTQYEEYIYRCEDERFELDVVLETNLATMRVLEGVHKKLQRMSPEEAARFRLDDSLGGNS
PTIHQRAIRRIYGDKAPDIIDGLKKNPVVAVPLVLRRLKAKDEEWREAQKGFNKIWREQN
EKYYLKSLDHQGITFKQTDIKTIRSKSLLNDIETLFDERHEQQEDSGEVITGPHMVLHYT
DKSILDDAANLVIHHVKRQTTYHKEDKLKIKQIVRHFLPDLLFHTRQEMSDDEKDMEDDE
EEEEDNKSDGKCENTGRRDLRERECKQTSSTSCATTNNNSNKRKSRSRGTDPEKEGETKS
VRESGNNNNNNNNNKTKDDSKSKSALNGDATEDEKVSIKTEADDEKPDIKEEPGTNANGN
TQSDDEYRLFMCNNNWYLFLRLHQILCCRLTTMYEHAVRIAAEEAKDRKDRKEATAVALR
LKPKNEIAVEDYYPALLDMIKNVLDGNLEPTAYEDTLREMFGIHAYTGFTMDKVVTSAVR
QLQHLVCDDPPVQCTTMYLSEAKKGAAGGPLASAHRRLAAEQAYQKKSERLLQDENCFKI
YTYKRNCRMTIELIDTEIEEENDSGGSAGSAVSHNTTVPSSAHSAIPPAVAEVERWSAYV
EKYVSSVAPQMSPAMQAQLSRKPVFLPRNLRSWRKLTAARQTNQEVEKDSCAEDVKPPVC
PDMDIVDNTQCKFNLSSFKMVFVVNSDSYMYKKQALKRAKQSHEHVSRRMRSGLVSWHSD
WCTRHVSEADQRAATDWFLGHTDGLRPNCTRVVRIDDPSRPPFAPYNKYKCELEESGGS
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcactggatacagaaagttcaagatttttgtttcacaaaatccaagattgcag
gtaagcgttagtgttccaggacaacagacaacagttgttcataccccccaaggtatccgt
catcacatcaccccaacacaccatcctccaccgccaccgccacagcctgttactgtcaag
ccccctcatcatccacagcctccaagatcagcgttgacaactggtggtgtaacaccacac
acaggaccaagtttagttggcactcacagtgttcacaatgtagcaggaagtggcagtggg
gctgggggaggtggtggtggcagcagtggcagtggaagtgggggtgttggagctaatagt
ggtaacactggtggaggaacagccagtgtcagtcaggtagcaagcagtgttagtgttggc
agcagcacccccacaggcacgaactccggtagcagctctaatgccaccagcagctctgca
gggggtgcacagcactccaccaacacagccccccagcaccccagccgggaacctcagcct
cccccacctcatcatcaccctcatcaccaccatcagcctccagcacaacctgtggagttc
aaccatgccattaattatgtgaataagattaagttgcggtttcaaggccagcctgacatc
tacaagcagttcctagagatccttcacacttatcaaaaagagcagagacacataaaggat
ggaggatcaattcctgccagaacactcacggagaccgaggtctatgagaaggttgcaaaa
ttatttgagaaccaagaagatttattgcaagagtttggccagttcctacctgatgcaacc
aataactcagctgcccaagctgctgtgtctgactttatggaccagtaccgcactcatcat
gggagtaataaaaatgtaagcaatgatcatacctcagtgaagaaacccaacctgaaaagc
agctgtggtatgggatctggaaataacatggtcagtgggcctggtaacccccccaacaaa
acatcaccaatgtttagccaccagcttaagagacctcacccaggaccaacacaaagccac
tcccatggtcatgcacatgctcagccacctgttaagaaaccaaaattgggatatctcaaa
gatatgagtgctgcagaagctggaaaacatgccactcttgctgagtatgccttctttgat
aaggtacggaaagctttacgccatgaggagacgtatcacaacttcctgaggtgcatcacc
ctgtacaacgaggaaatcatcactcgcgctgaattggtgcagctagtccacccattcctt
gctaaattcccagacctattgaagtggttcaaggactttgtaggatatcgagaaggagct
ttaggcagttcagatatcatcccttcaactgttgccaagcaggaaaggattagtggtgat
ttggcaatggagatcgattatacaacatgcaagagactgggcgcttcgtactgtgctctg
ccaaagtcttatcctcagcccaagtgttcaggaagaacaggtctctgcaaagaagttctt
aatgatacctgggtttccttcccctcttggtcagaagattccacttttgttacctcacgt
aaaactcaatatgaagagtacatttaccgttgtgaggatgaaagatttgagttggatgtt
gttctggaaaccaacttggctacaatgcgtgtgttggagggagtacacaagaagcttcag
aggatgagtccagaagaggctgcaagatttaggttagatgattcccttgggggtaactct
ccaacaatacaccagagagccatcaggcgaatatatggcgacaaagctcctgacattata
gatggattgaaaaagaatccagttgttgcagtgcctttggtcttgagaagattgaaagca
aaggatgaagaatggagggaagcacaaaaaggctttaacaaaatttggagagaacagaat
gagaaatattacttaaaatcacttgatcatcagggtatcactttcaagcagacggacatc
aagactataagatccaaaagcctcttaaatgacatagaaactttgtttgacgagcggcat
gagcagcaggaggacagtggtgaggtgatcactggcccccacatggtgctccactataca
gacaagtctatcttggatgatgcagccaacttggtgatccaccatgtgaagagacaaact
acataccataaggaggacaagcttaagattaagcagatagtcagacacttcttgccagac
ctcttgttccacacaaggcaggaaatgtctgatgatgagaaggatatggaagatgatgaa
gaggaagaggaagacaacaagagtgatggaaagtgtgaaaatacaggccgccgagatctc
cgggaacgagagtgcaaacaaacctcttccacctcatgtgccaccactaataataattct
aataaaagaaaaagtagaagtagagggacagatccagaaaaagaaggagagacaaaaagt
gttagagaaagtgggaataataacaataacaacaataacaataaaaccaaagatgatagt
aagagcaaatctgctcttaatggagatgcaacagaggatgaaaaagttagcattaagaca
gaagcagatgatgagaaaccagacatcaaggaggagcctgggaccaatgctaatggaaac
actcagtcggacgatgagtacagattattcatgtgcaacaacaactggtacctgttcctc
cgtttacaccaaattctctgctgccgtctcaccacaatgtatgaacatgcagtacggata
gcagcagaggaagctaaagataggaaagaccggaaagaagctactgctgttgccctcaga
ctaaaacccaaaaatgagattgctgttgaagattactaccctgccttactggacatgatc
aagaatgtcctggatggtaatttggaaccaacagcctatgaggatactttaagggagatg
tttggaatccatgcttacacaggcttcaccatggataaagtggttactagtgctgtaagg
cagttacaacacttggtgtgtgatgaccctccagtccagtgcaccaccatgtacctgagt
gaggcaaagaaaggtgctgctggcggacctttagcctccgcacacagaaggttggcagca
gaacaagcttatcagaagaagtcagagcgcttattacaagatgagaactgcttcaaaatt
tacacatacaaaagaaactgtagaatgaccatagagctgatagacacggagattgaagag
gagaatgacagcggaggcagtgcaggctcagcagttagtcacaacaccacagttccttcc
tcagcacactctgcaattccacctgctgttgctgaagtggaaagatggagtgcctacgtt
gaaaaatatgtttcttccgtcgcacctcagatgtctcctgccatgcaggcccagctgtcc
agaaaaccagtatttctcccacgtaatcttcgatcttggagaaaactgacagctgcaaga
cagaccaatcaggaagttgaaaaggatagctgtgctgaagatgtaaaacctcctgtgtgc
cctgatatggacattgtagacaacactcagtgcaagttcaatctctcctctttcaaaatg
gtatttgtagtgaacagtgattcctacatgtacaagaagcaagcactcaagagagcaaaa
cagagtcatgaacatgttagtcgaaggatgcgcagtggccttgtttcctggcacagtgat
tggtgcacaagacatgtatcagaagcagatcaacgagctgctacagactggttcctgggg
cacacagatgggttgcggccaaattgcacaagagtagtgcgcattgatgatccttcccga
cccccatttgcaccctacaacaagtacaagtgtgaactggaagagagtggtgggtcataa
DBGET
integrated database retrieval system
