Penaeus japonicus (kuruma prawn): 122255460
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Entry
122255460 CDS
T07703
Name
(RefSeq) retinoic acid receptor beta-like
KO
K08362
thyroid hormone receptor beta
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja04080
Neuroactive ligand-receptor interaction
pja04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122255460
04081 Hormone signaling
122255460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pja03000
]
122255460
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pja03310
]
122255460
Transcription factors [BR:
pja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122255460
Nuclear receptors [BR:
pja03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
122255460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122255460
NCBI-ProteinID:
XP_042875446
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All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MTTMMVGGGGFGGGGLGVGRRGLSPPSGSNSHNQRLSSPQPPLSPASSDSPTSPVSPGRH
GGNKACGVCGDVAKSMHFGGLSCDSCKAFFRRSVQNNAYKGFTCPYEKKCVIAVSSRKAC
QYCRFHKCLTIGMEKGWVMSEDERRKMMQQRQEKKQKTDQKKPNDTKELDKYTLSEEDNT
EIQIIVSLYRKAYQDVPYDSSCQTEGTIGVMSPWMTFCKRIGYFFSLFREFADLPSGDQA
TLLKTAITSACIIMGSVVYDSSTGRWPGKPITRSGFVPNVTSQSVERLVPTDLMSRVEQF
FRKFQQICPDETMAMILILVALYSSELMGLEAKETIQALQDRYTRVLHHYVAWKYKEKSH
MMFPKVLVSLADIRELAERTCQMRIQQGAVSNLNITSLLPKSNPQDSSTSTPMETCQSEE
AAATDSTDSGLVIVKEENDIDCNAALNSAAAHKRARLEATGGARDHTYQKILQKVMEQMH
SSSLHLRAPQLLPIVIHIVKKIKAEGTGTDDSSHTTKTHHVKQPRGGTKRRQVEVKQEQI
EEDCNAQFSQDLPQSDLSDPMSPDTHHHKPHFNLNQQPQQDLHPPQTQILHQQQQQYIPP
PVDFNTGYPASPMDSTDSFDMSPNLMLSPHHSADIRLSPQVPLMAPVAPYTPPSVVTSSP
MPVQQSEVFPVADMPLPSPMAAPSPYSDTSSSSPPESSQSPLSELFTEELSDVEIDVLTQ
LMDYVCNSNLENVSSIKEIIPEHLLNELQTKLWAYSLKQE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatgatggtaggaggcggcggttttggcggcggtggcctgggcgttgggcga
aggggtctatcgcctccttcgggatcgaatagtcacaaccaaagactctcttcaccacag
ccccccctgtcacctgcatccagtgactcacctacttcccctgttagccctggacggcat
ggtggaaacaaagcatgtggtgtttgtggtgatgtagcaaaatccatgcacttcgggggg
ctgtcttgtgattcctgcaaagccttcttcaggagatcagtgcagaacaatgcctataaa
ggatttacgtgtccctatgagaagaaatgtgtgattgctgtgtcctcaagaaaagcttgt
caatactgcagattccacaaatgcctcaccataggcatggagaagggctgggtgatgtca
gaggacgagcgccgtaagatgatgcaacagcgtcaggaaaagaagcaaaaaactgatcag
aaaaagcctaatgatacaaaggagcttgataaatataccctgagtgaggaggataataca
gaaatacagataattgtttctctctacagaaaagcataccaggatgttccttatgattcc
agctgccagactgaaggtacaataggtgtcatgtctccctggatgacattctgcaagaga
ataggatatttcttttcactttttagggaatttgctgatcttcccagtggtgatcaagca
acactgctgaagactgccattacatcagcttgtattatcatgggctctgtggtgtatgat
tcaagtacaggcagatggccagggaaacctataacgagatcaggttttgtacctaatgta
acttcacagagtgtagagcgcctagtgcctacagatttaatgtcacgtgtggagcagttc
ttcagaaaatttcagcagatatgcccagatgaaacaatggccatgattcttatattggtg
gccctttactcttcagaactaatgggtttggaggcaaaagagaccatccaagctcttcag
gacagatatacacgtgtcttgcaccattatgtagcatggaaatacaaggaaaagtcacac
atgatgttccccaaagtgttggtgtctcttgctgacatccgtgaattagcagagcgcacg
tgtcagatgcgcattcagcagggggctgtttctaacctaaatatcacatcacttcttcca
aaatcaaatcctcaggattcttccacatcaacacccatggagacttgccagtcagaagaa
gcagcagccacagatagtacagatagtggattggtgattgtaaaagaagaaaatgatata
gactgcaatgcggcacttaacagtgcagctgcccacaagcgtgcaaggttagaggcaacc
ggtggtgctcgtgatcatacctaccagaagatattgcaaaaggtaatggagcagatgcac
agttcttctctgcatttacgggccccacagttgctaccaatcgtcatccatattgtaaag
aagatcaaagctgaaggaacaggtactgatgattcatcccacaccaccaaaactcatcat
gtcaagcagccaagaggtggtacaaaacggagacaggtggaagttaagcaggaacaaatt
gaggaggactgcaatgcacagttctctcaagatttacctcagtctgaccttagtgaccca
atgtctccggacactcatcatcacaagccacacttcaatcttaatcaacagcctcagcaa
gatcttcacccacctcagacccagattttgcaccagcagcagcagcagtacatacccccg
cctgtagattttaatacgggatacccagcctccccgatggattcgacagactcattcgac
atgtcgccaaatctaatgctttctccgcaccattcggctgacatcaggctgtcacctcaa
gttccgctcatggcgcctgttgctccctatactcctccttcagtagtgacgtcatcaccc
atgccagtccagcaatcagaagtctttcccgtggcagatatgccattaccctcaccaatg
gctgctccttcaccttactctgatacttctagctcatcaccacctgaaagttcccagtca
ccactatctgagctcttcacagaagagttgtcagatgttgaaatagatgtactaacacag
ttgatggactatgtttgcaattcaaatctcgaaaatgtaagctctatcaaggaaattata
ccagaacatttactaaatgaacttcaaacaaagttgtgggcatattctttaaaacaagaa
taa
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