Penaeus japonicus (kuruma prawn): 122255486
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Entry
122255486 CDS
T07703
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122255486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pja03041
]
122255486
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122255486
Spliceosome [BR:
pja03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122255486
Complex B
122255486
Complex C
U2 SnRNP specific factors
122255486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
122255486
NCBI-ProteinID:
XP_042875516
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MSYNRGRGFGFGGFSFNKKQETTPPPPNATLSKHGYHTMTAISQNAISGGCGYGQPRKRP
RDEDEYFDDEDESFDGAYQPAPGSPGPQRKEDSDSDEDPLDAFMAGIEQEVKRTKTKGAT
EKKEMKGVRDDIDEEDDEESYYRYIQENPNAGRQQEDSEDEIEYDEDGNPIAPKKPKYID
PLPPIDHSTIEYQDFTKNFYQEHEDIAALAPIQTNELRIKLGIKVTGFDAPKLVTSFGHF
GFDEALMKAIRKSEYTQPTPIQSQAVPIALSGRDAIGIAKTGSGKTAAFIWPMLVHIMDQ
KELAPDDGPIGLILAPTRELAQQIYTEARRFGKVYNIQVVCAYGGGSKWEQSKALEAGAE
IVVATPGRMIDMIKMKATNLRRVTFLVLDEADRMFDMGFEPQVRSICDHVRPDRQTLLFS
ATFKRKVERLARDVLTDPVRVVQGELGEANQDVTQIVKIMNTGGHKWNWLNKRLVEFMSA
GSVLIFVTKKANAEELCKNLVTKEYEALLLHGDMTQFERNDVITAFKKKDKPILVATDVA
ARGLDIPHIKTVINFDVARDIDTHTHRIGRTGRAGEKGTAYTLVTEKDKEFAGHLVRNLE
GAAQEVPSELLELAMQSTWFRKSRFKQSKAKALGGRGLGFRERPGLGSTPNNESSGGGGG
GSGSGVVNVGPAGQAYGGGDPSTTGPATNRLAAMKAAFQSQYKSQFTAASAETAWHMDSK
MQNQQQAPRERKRKSRWDD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgagttacaacagaggccgtggctttgggtttggggggttttcatttaacaagaagcag
gagacaacaccacctccacccaatgccacactcagcaagcatggttaccacaccatgaca
gccattagtcagaatgccatatctggtgggtgtggatacggccagcccaggaagagaccc
agggatgaagatgaatactttgatgatgaggatgaaagctttgatggtgcttaccagcca
gctccagggagtcctggaccccaaagaaaagaagattctgattctgatgaggatcctttg
gatgcttttatggctggtatagagcaagaggttaaaagaacaaagacaaagggtgcaaca
gagaaaaaggaaatgaaaggtgtgcgtgatgacattgatgaggaggacgatgaagagtct
tattacagatacatacaggagaatcccaatgctggaagacaacaggaagatagtgaagat
gagatagagtatgatgaagacgggaaccccatcgctcccaagaaacccaaatacattgac
ccacttccgccaattgaccactccacaatcgagtaccaggacttcaccaaaaatttctac
caagagcacgaagacattgcagctctcgcacctatccaaacgaatgaactgagaatcaag
ttggggattaaggtgacaggctttgatgctccaaagttagtaaccagctttggccacttt
ggctttgatgaggccctcatgaaggccatccggaagtcagagtacacgcaacccaccccc
atccagtcacaggctgtgccaattgctcttagtggacgtgacgccattggcattgccaaa
acaggcagtggtaagacggcggctttcatttggccaatgttagtgcacataatggatcag
aaggagctcgccccggatgatggtccaatcggactgatattagctccaacgcgagagttg
gcacagcagatatacacagaggctcgcagatttggcaaagtttacaacatacaggttgtc
tgtgcttatggtggaggtagcaagtgggaacaaagcaaagcattagaggctggtgcagaa
atagttgtggctactcctggcagaatgattgatatgataaagatgaaggcaactaactta
cgacgcgtcactttcctcgttcttgatgaagctgatcgtatgtttgacatgggttttgaa
ccacaggtaagatcaatctgtgaccatgtgaggcctgaccgtcagacattactattctct
gcaacatttaagagaaaagtagagagactggctcgagatgtcctcacagatcctgtccgt
gtagtgcaaggagaacttggagaagcaaaccaggatgtaacacagattgtgaagatcatg
aacacaggcggccacaaatggaactggctgaacaagagacttgtagaattcatgtctgct
ggttcagtgcttatatttgtaactaaaaaagccaatgcagaggagctctgcaaaaatctt
gttactaaagagtatgaagcacttctcctacatggtgacatgacgcaatttgaaaggaat
gacgtcataactgcattcaagaaaaaggacaagcctatattggtcgctactgatgtggct
gccagaggtcttgatattcctcatattaaaacagttataaactttgatgtggccagggat
attgatacccatacacataggattggacgaacaggtcgagctggtgagaaaggcactgca
tacacactggtgacagaaaaggacaaggagtttgctgggcatcttgtgcgaaaccttgaa
ggggcagcacaagaggtcccatcggagctactagaactagctatgcagagtacctggttc
cgcaagtctcggttcaagcagagcaaggccaaggctcttggaggccgtggtcttggcttc
agagagcggcctggtttaggatcaacaccaaataatgaatcatcaggaggtggaggggga
ggaagtggaagtggagtagtcaatgttggtcctgcaggccaggcatatggaggaggtgac
cctagcaccacaggacctgcaacaaatcgcctggctgctatgaaggctgcctttcagtcc
cagtataagagtcagttcacagccgcaagtgcagaaacggcttggcacatggacagtaag
atgcagaaccagcaacaggcgccacgagaacgtaaaagaaagtcaagatgggatgactga
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