Penaeus japonicus (kuruma prawn): 122255617
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Entry
122255617 CDS
T07703
Name
(RefSeq) protein smg8-like
KO
K18734
protein SMG8
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122255617
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
122255617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
122255617
NCBI-ProteinID:
XP_042875749
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MTLGDDIVPHKGHFTLPTTWAPQDSSAKQRVVVVAVFGKSGLDSGGCKATALELMVGRKI
FQRDMTHPIAIDEETMTGVEGYYDPDRRAIYLHLTGAYDTAALISALETMHQQLQEKGFL
MAWSSLKLAYARSLLVLFSVSHLLLLCHPTHVFDISYIHLFRTLDAIRSKAQNYIAETLR
LVPGISKDWVSFGRLCAPRVLFIFSSHLLPAQIRSGQDSSAVHRSVGGHRSYRTSAPPSP
LRNLELALEDQIYRLLRKSRVITNISANSLFALPNNQAYVYIMEEGQEEVPAASLINDTL
HNLCSASDANLSSELSQLTIGSGSKTTSSEKGGSRGTSNWGGISGSTSTWDTSLTCSASS
DTSAADSLSASILSGVATERKRNLEHSFNVFLQQHIDQALGKGFDDNVGRHSGPVFFYVP
HAGIWFEAVNKVYKFFCCEPSEKDTKAKQVLNSLQNLVKTEVRFSDARCAKVLPIAISAY
KDGLPPHYTQLHHQEKLELALRVLGAQARGPMYDEYVAQLEEACERIWQDGRMGCETLSL
TGNTCKHPRHKTPSDSEDDSSIPVMSHSSGIGYVSFCNCGRRQDQREDPFSTKAANYTFY
EQLAETCCSRLDTISFPTFKSSVTDAKAATVNGSESEDIEVDTITTVKRESREQQDSDTP
HTPGLSLVGTGLSGSMNSTTGTAAARMTGDPAHIGSQVVITLTKDDSKTITKDRGIIRQA
STTEYLPGMLHTNSPAGLLPRWSSWSLCCLGPSSLYSHNAGICDQPGFLPGTNFLLPWDV
TVKIEDRNKWPAIADTLGKKALLLKNKKNRVGDIHEFSVKIFLGVEYECVRGHRFMMATP
DRHLKASPSGLVKDNATKIANADMPLYFPCPCSRSGGIVNGQLLRLHVVTPKAPVNVTLN
PQVQPGPDPCSRYIPQPCNSLPVKLSASAYWVLRLPYVYVGEQGPHYPPDPRQPTPPSFA
RLLKGCYGISQVTLER
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgacacttggagatgatattgtcccacataaagggcactttacgctccctacaacatgg
gctccccaggactcctcagcaaaacaacgtgtggtagttgtagctgtgtttggcaagagt
ggcttggactctggaggatgcaaagccactgccctagagctcatggtaggaaggaagatc
tttcagagggacatgacacaccccattgctatagatgaagagacaatgactggagtggag
ggatactatgatccagaccgccgagccatatacctccacctgaccggggcatatgacaca
gcagctctcattagtgccctagagaccatgcaccaacagctccaggaaaagggatttttg
atggcctggtccagcctgaaactggcctatgcacgaagtctgctggtgttgttttctgtc
tcccatttgctccttctctgccatccgacacatgtctttgatataagttacattcatctt
ttccgtaccctggatgcaatcaggtcaaaagcccagaattacatagcagaaaccttaagg
cttgtgccaggaatcagcaaggattgggtctcatttggtcgactgtgcgcacctcgagtt
ctcttcatattctcttcacatcttttaccagcacagattcgttcaggacaggacagttct
gctgttcacagatctgtggggggccacaggtcatacagaacctccgccccaccaagccct
cttcggaatctagaacttgcattggaggatcagatttaccgtctccttcgcaaaagcaga
gtcattaccaacatcagtgcaaattctctatttgctcttccaaacaaccaagcatatgta
tacatcatggaggaagggcaggaggaagtgccagctgcctctttgattaatgacactctt
cataacctgtgctctgcatcagatgctaatttaagcagtgaactaagtcaattgaccatt
ggatctggcagcaagactacctcatcagaaaaaggaggaagcagaggaactagtaactgg
ggtggcatatcaggttcaactagtacttgggatacatctctaacctgttcagcctcctca
gatacttcagctgctgactccctcagtgcatctattctgtctggggttgcaacagagcgg
aagagaaaccttgagcacagctttaatgtgttccttcagcaacacattgatcaggcattg
ggaaaagggtttgatgataatgttggaagacattctggtcctgtctttttctatgtccca
catgctggtatatggtttgaagctgttaacaaagtgtacaagttcttctgttgcgagccc
tcggagaaagatacaaaggcaaaacaggttctaaatagccttcaaaatctggtgaagaca
gaggtcaggtttagtgatgctcgatgtgccaaagtcttgccaattgccatttctgcatac
aaagatggtcttcccccccactacacccagcttcatcaccaggaaaagcttgagttggct
ctgagagtactaggtgcccaggcaagagggccaatgtacgatgagtatgtggcccagctg
gaggaagcctgcgagaggatttggcaggatggcagaatgggttgcgagacgttgtccctt
actggcaatacttgtaaacatccaagacacaagacaccttctgattcagaggatgacagt
tccatacctgtgatgagtcacagttctggaattgggtatgtcagcttttgcaactgtggg
cggagacaagaccaacgcgaggatccattttctaccaaggcagcaaattacacattttat
gaacagctggctgaaacgtgctgcagccgtctggatacaatctctttcccaacattcaaa
tcaagtgttactgacgcaaaagctgcgactgtgaatggctcagaaagtgaagacatagag
gttgacacaatcactaccgtcaaacgagaatctcgcgaacagcaagactcggatacccct
cacaccccagggctgagtctggtgggaacgggactgagtgggagcatgaacagcactacg
ggtacagcagccgcccgcatgacgggtgaccctgcacatattggctcgcaggtagtgatc
accctcaccaaagatgactccaaaaccattactaaagaccggggaataattcgccaggcc
tcaacgaccgagtacctcccaggaatgcttcacaccaactcaccagcaggtttacttcct
cgttggtcttcatggtcactctgctgtttgggaccctcttccctctactcacacaatgca
ggtatatgtgaccagccaggatttttgccgggcacaaatttcttgttaccttgggacgtt
acggtaaagatcgaggaccgaaacaaatggccagccatagcagacactcttggcaagaaa
gctcttttgctaaaaaataaaaagaacagagttggtgatatacatgagttcagtgtaaag
atattccttggtgttgaatatgagtgtgtcagaggacatcgattcatgatggcaacccca
gatcgacatctgaaggcttctccatcagggctagtaaaggataatgccactaagattgca
aatgctgatatgccactctacttcccatgcccttgcagccgttctggaggcattgtgaat
ggacagctgttgaggcttcatgtggtaactcccaaagcaccagtgaatgtcactctaaac
cctcaagtgcagccggggccagatccttgctcaagatatattccacagccttgcaactca
ctcccagtcaaactctcggcctccgcttactgggttctgcgactgccttacgtgtacgtt
ggtgagcaagggcctcactatccccctgacccccggcaaccaactcctccatcttttgca
agactactaaaaggctgttacggaatttctcaagtaacacttgaaagatga
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