Penaeus japonicus (kuruma prawn): 122255640
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Entry
122255640 CDS
T07703
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122255640
03041 Spliceosome [BR:
pja03041
]
122255640
03036 Chromosome and associated proteins [BR:
pja03036
]
122255640
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122255640
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122255640
mRNA cycle factors
Common to processing body (P body) and stress granule
122255640
Spliceosome [BR:
pja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122255640
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122255640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122255640
NCBI-ProteinID:
XP_042875794
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MSNVPTHNGVGLEQQFAGLGLEGRDHIGQRGGGRGGGSRGGGRYVPPHLRNRLEDAPPPD
TSDRNSRDGFGGWYGSRGSQDSGRGWDQDRDRDRDRDLYNYSKCVGPPAFWGIYSPPLPY
GIMQQGGRRNGDYQPSYQQRDNRGGGGGGGGYRSNDGQRFREHDDRWRGGRGDNRRDDRR
GYDDRRDIGGGGPPRNNRWVEDDRDRSSGGGGQGGGRWQDRGNDRDDWSQPLARNEVLEA
ELFNNVGPSTNSGINFDKYDDIPVEATGEDIPACINSFADIKLTEIIKQNISMARYDRPT
PVQKYALPFILAKRDLMACAQTGSGKTAAFLVPILNQIYEQGPVQVKNNNPRGRNKQYPL
SLILAPTRELATQIYEEARKFSYRARVRPCVVYGGADVVSQMRDLSRGCHLLVATPGRLA
DMIDRGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEEDNMPPTGQRQTLMFSATFPKE
IQRLAQDFLDNYIFLAVGRVGSTSENITQKIVWVSEDDKRSFLLDILNAAGLDRATEANK
DEKMAMGVPPRREESLTLVFVETKKGADALEEFLYRHGYPVTSIHGDRSQREREDALRVF
RSGQCPILVATAVAARGLDIPHVKHVINFDLPSDIEEYVHRIGRTGRMGNLGLATSFFND
KNRNMVRDLVELLQEAKQELPKWLEAIASEARFGGGGGRGRAGAKRFGGGFGSRDYRQAD
RNKGPHTAGPARPGGGFNSFGGAAPHFNHYGGYGGFSGSQGYNSYNTSGASGTDWWGGN
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtacccacccataatggagtaggtctagagcagcagtttgctggtctaggc
ttggaggggcgagaccacattggtcaacgtggaggcgggcggggaggtggcagtagggga
ggtggccgctacgtcccaccccacttaaggaatcgcctagaggacgctccgcccccagat
acttcagataggaattctagggacggtttcggtggttggtatggttcccgagggtcccaa
gactctggtcgtggttgggaccaggacagagacagagacagagaccgagacctatacaac
tacagtaagtgcgtaggccctcctgccttttggggtatctacagtcctccgttaccttat
ggtatcatgcagcaaggtggacggaggaacggggactaccagccaagttatcagcagaga
gataacagaggaggaggaggtggtggtggtggttacaggagcaatgatggacagcgcttc
cgggaacacgatgaccgctggaggggaggacgaggggacaaccgcagggatgatcgccgg
ggatatgatgaccgtcgtgacataggagggggtggccctccgcgtaataatagatgggtc
gaagatgaccgtgatcgctcctctggtggtggtggccagggaggcggccggtggcaagac
cgcggaaatgacagagacgactggtcacagcctcttgctaggaatgaggtccttgaggca
gaactcttcaataatgtaggtccatcaaccaacagtggaatcaattttgataagtatgat
gacattcccgtggaggctactggtgaagacattcctgcttgtatcaatagctttgccgat
atcaaactcacagagatcatcaaacagaacattagtatggctcggtatgacaggcccaca
ccagtccagaaatatgccctgcccttcattcttgctaagagagatctgatggcatgtgct
caaacaggatcaggaaagaccgctgcattcttggtcccaattcttaaccagatatatgaa
cagggtccagtccaggtcaaaaataacaaccctagaggacgcaataagcaatacccactg
tctttgatcttggcccccacacgtgagttggccacccagatctacgaggaggcccgcaag
ttctcttacagggcccgagttcgtccatgtgtggtgtatggtggtgctgacgtcgtgtca
cagatgagagatctgtcccgtggctgtcaccttttagttgccacccctggacgtctagca
gatatgattgaccgtggcaagattggtcttgattactgcaagtacctggtactcgatgag
gctgaccgcatgctggacatgggttttgagcctcagattcgccgtattgttgaggaggac
aacatgcctcccactggccagcgccaaactctcatgttctctgctactttccccaaagaa
atccagcgacttgcccaggatttcctggacaactatattttcttggctgtgggacgtgtt
ggttccacatcagagaacatcacacagaagattgtctgggtatcagaggatgacaagcga
tccttcctccttgatatccttaacgctgctgggttggaccgtgcaactgaggccaacaaa
gatgaaaaaatggccatgggtgtaccccctcgcagagaagaatccttgacgttagtgttc
gtcgagaccaaaaagggtgcagatgcccttgaggagttcttgtaccgtcatggataccct
gtgacaagcattcatggcgaccgaagccagcgagagcgagaggacgctttgcgtgtcttc
cgctccggacaatgccccatccttgtggcaactgctgtggcagctcgtggtttggacatt
ccacatgttaagcatgtcattaattttgatttgccatcggacattgaggaatatgttcac
cgtatcggtcgaactggtcgtatgggtaaccttggtcttgccactagtttcttcaatgac
aagaaccgtaacatggtccgtgacttggttgaactgttacaagaagccaaacaggagctt
cccaagtggctagaggccattgcctcggaggcacgcttcggaggcggaggaggaagaggc
cgtgctggagccaagcgctttggtggaggctttggatcccgagattaccgtcaggccgac
cgcaacaagggcccccacactgcagggcctgctcgtccaggtggaggattcaacagcttt
ggtggagctgctccacacttcaatcactacggagggtacggaggtttcagtggaagccaa
ggctacaacagctacaacacctctggcgcttcagggacagactggtgggggggtaactga
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integrated database retrieval system
