Penaeus japonicus (kuruma prawn): 122256494
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Entry
122256494 CDS
T07703
Name
(RefSeq) zinc finger protein swm-like isoform X1
KO
K13192
RNA-binding protein 26
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pja01009
]
122256494
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122256494
03041 Spliceosome [BR:
pja03041
]
122256494
Protein phosphatases and associated proteins [BR:
pja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122256494
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122256494
Spliceosome [BR:
pja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122256494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
Nup35_RRM
PWI
zf-CCCH
zf_CCCH_4
COOH-NH2_lig
Motif
Other DBs
NCBI-GeneID:
122256494
NCBI-ProteinID:
XP_042877158
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MIIDHPELLKQWLTGFLAPLCDADPEALAKYCLALVRKDRPISELKAGMIEQLDVFLQSN
TKSFVDKFLQVTTTRSYIPKNSSSSLSSSTGPFSTDPSSPSLNNNSDTGPPPLPPTPVSK
QSSGHSPDSTTPPNAVPPPATSSSTGMQPAPPPPPPSSAAAPPPPPPPESAPPPPVPASV
ITRKEEVSSSQRSRKSESDRDRDDRRGRRRSPSRGRSRSRSRSRSRSRDRSRRSRSRGRS
GRSKYEDRRRRSPPTKRYRRSRTRSRTRSPRRSRSPRRSRSRERRSRSRNRSRTISPRNN
RASGRGRSPPPTPRSPTPPRKSKSLPRDEKRESPHGTSPVAEVRPEPRNDPSSVIQSVIA
VKHTDFVPPPPAGKKQRCRDYDEKGYCMRGDMCPFDHGSDPVVLEGIGAVLDFPPPAVPG
AQGYTPAPAPPQGVPRPRHPPPRHPQYGKTIGEYTPRDPSLWGGQVNSSTGPYYGANGGQ
GRGTSGGGPRFSAPPPPLPSGTSRELISVPVNNEASMVSSGGVRPSLAKRLGPAVPPANN
IMPMASKPGRPDLDNCTLELKKIPPGLNTISHLNDHFAKFGTIVNIQVQNEGNPESALVT
FASHSEANAAYRSTEAVLNNRFIKLFWHNPQNKPDRPGSYPSHAVRPVHDRLGVRHPNKT
LNKMVVEHTSEDKNEKVMISRGSLVKTVYNTHALHSAAAATAVASTTAAGPTTGAVTPTS
PVSGPPSLPATAPDSTQTAADSKRQEIDAILKQRELLAAEVAAKQKVEKQKAEALKLKSE
VEQRKRMLLDKQMQQLKVLVTKFDKNKATMKAEEKKLLLETIKSLQAAIDTTRAQLVAGE
TPKSKVQVDREILDTELELYTVQAEGGDISKLRARLNQLRAQQQAAGYPASRSARHTPYG
TGRGGHYGRGRGVASLARGGLRGRGRGRGYGGHSFSSVDRRTTKINASGFEREDKEGVLA
HFSTLGTVSNYIWDDQTPTVTIQYSTRREAEKAMSEGRTLGDRLLTLTWAFDSPLPVSSQ
AAGGGVAGGHHVATHAYSNVAPHSTTPSLSPDDTLEEITEEIVEEVETEEGEHPELFEEE
EEVEEDEEEVRSWRR
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgatcacccagaactactcaagcagtggttaacaggcttcctagcgcccttg
tgtgatgctgacccagaagccttagccaaatactgccttgctttagttcgtaaggaccgc
cccatctcggagctgaaggctggcatgattgagcagctagatgttttccttcagagtaat
accaagtcattcgttgataagtttcttcaagtaactacaacacggtcttacataccaaag
aactccagttcatctctgtcatcgtctacagggccattttcaacagacccttcctcccct
agtttgaataataatagtgacacgggccctccaccgttacccccaactcctgtttcaaag
cagtcatctggccactctccagattcaaccacccccccaaacgcagttcctcctcccgct
acctcctcatctactggcatgcagcctgccccaccacccccaccacccagttctgctgct
gcccctcctccgccaccgccgcctgagtccgctcctcccccaccagtccctgcatctgtg
atcactcgcaaagaggaagtgtcctcctcccaaagatccagaaagtcagagtctgaccga
gatcgtgatgatagacggggaagacgaaggtcaccatcgcgaggaagatcccggtctcgt
tcacgatccagatcaaggagtagagacaggtcaaggagatcacgttccagaggtcgctct
gggcgtagtaaatatgaggacaggaggaggagatcaccaccaaccaaaagatatcgtagg
tcgagaacacgctcacgcacccgaagcccaagacgttcaagaagtccacgacgctctagg
tcgagagagagaaggtctaggtctagaaacaggtcacgcactatcagtccaagaaacaac
agggcgtcaggccgagggagatcaccacctcccactccacggtcaccaacacccccaagg
aaatcaaaatccctgcctagagatgagaaaagagaaagtccacatggaacctcacctgtt
gctgaggtgaggccagaaccaaggaatgacccaagttctgtcatccagagtgtcattgct
gtaaaacacacagactttgtgccaccaccacctgcaggcaagaaacaaagatgtcgggat
tatgatgagaaaggttattgtatgcgaggcgacatgtgtcccttcgaccacggctcagac
ccagtggtacttgagggtattggggcagtgctggacttcccaccacctgctgtgccaggt
gctcaggggtacaccccggcacctgctccaccacagggtgttcctagacccaggcatcca
cccccaagacatccacagtatggtaagacaattggtgagtatactccccgtgacccaagt
ttgtggggtggacaagtcaacagtagcacaggaccttactatggagccaatgggggtcag
ggtagaggaactagtggtggtggacctcgtttctcagcacctccaccacctctgcccagt
ggaacgtcaagagagctcatcagtgtgccagtcaataatgaggcatccatggtgtcaagt
gggggagtaagaccatctctagccaagcgcctaggcccagcagttcctccagcaaacaac
atcatgcccatggcctcaaagccaggccgtcccgacctagacaactgtacacttgagctg
aaaaaaatacctccaggcttgaatactatttcacacttgaatgaccattttgcaaagttt
ggtactattgtcaatattcaggtacaaaatgaaggtaatccagagtcagctctggtaacc
tttgcaagccattcagaagcaaatgcagcataccgcagcacggaggcagttcttaacaac
aggtttatcaagctcttttggcacaacccacaaaacaaaccagatcgtcctggaagttac
ccgtcccacgctgtcagacctgtgcatgacagactgggcgtcaggcaccctaacaaaacc
ctcaacaagatggtggtggagcacacaagtgaggacaaaaacgaaaaggtgatgatctct
cgaggcagcctagtcaagactgtttacaacactcatgccctccattctgctgctgctgct
actgctgttgcctctacaactgcagctggccccacaacaggagctgtcactcccacttcc
cctgtcagtggccctccttctttacctgccacagcacctgactcaacccagactgctgct
gacagtaaaagacaagagattgatgcaatcttaaagcagagagaattgctagctgcagag
gttgccgctaagcagaaggttgaaaagcagaaggcagaagctctaaagctgaagtcagag
gttgagcagaggaagagaatgttgttggacaagcagatgcaacaactcaaggtacttgta
acaaagtttgacaaaaacaaagccaccatgaaggcagaagagaaaaagttacttctagaa
actatcaagtccttgcaagcagccattgacacgacaagagcacagttggttgcaggggag
acacccaagagcaaagtccaggtagacagagaaatcctcgacactgaactggagttgtat
actgtccaagcagaaggaggagacatttccaagctacgtgcacgactcaaccagttgcga
gcacaacagcaggcagcaggataccctgcatcaagatctgcaagacacactccatatggc
actggaaggggaggacactatggtagaggcagaggagtagcaagtttggcccgtggaggg
ttaagaggaaggggcaggggtagagggtatggcgggcactcattttcatctgttgaccga
agaaccacaaagatcaatgcctctgggtttgaacgtgaagacaaggagggagtgttggct
cacttttcgaccctaggcacagtctccaactacatctgggatgaccagactccaactgtg
acaattcagtactccacacgacgggaggcagagaaggcaatgtcagagggtcggactctt
ggtgatcggctcttgaccctcacctgggcctttgattcccccctgcctgtttcctcacaa
gctgcaggaggaggagtggctggagggcatcatgtggccacacatgcttactctaacgtt
gccccacactccaccactccatctctttccccggatgatacacttgaggaaattacagaa
gaaatagttgaagaagtggaaacggaagaaggggagcaccctgagctctttgaagaagag
gaagaggtagaagaggatgaggaagaagtcagatcatggaggaggtag
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integrated database retrieval system
