Penaeus japonicus (kuruma prawn): 122258297
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Entry
122258297 CDS
T07703
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K14323
protein CASC3
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03013
Nucleocytoplasmic transport
pja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122258297
03015 mRNA surveillance pathway
122258297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122258297
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122258297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122258297
NCBI-ProteinID:
XP_042880052
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MADRRRRRKLASNDDSEDCSEESDDEQSGLRKSLTGSDGGDSEYESADEEELGDEEEEDD
DELILMPDGLGVPGEDNKPLDDDEDRKNPQYIPKKGTFYEHDDRTAEDDAEKPVPEEPVV
KKETAKKKVWKEDDRWNHDKFNEFDQAPKSREELIAIYGYDIRNEEGPPRARRRRRYGRG
PNKYTRNWEDLDAYAKPTRGGTVRGGIGRGGNRSWTGSRKTLENDEEFPALNSSLQNSKQ
LMDDPQAEQNIPNSESPRTDQQRPIHDDQILGNTDGHKQQQPHQSPQQQHHQKNSIASPQ
IQDVRMENPGRGRGGRGRGRGAGRGNNRHNDERSHNYQDGRPAGRGGRGGHQQRPPQQHP
SHGPRDMEELAVDMKNISVSAQNREEQFRGKNRGGGNSDNRRNMVPPRLQESAAAAASAQ
GRGNRGGNASPGGDGSASRPKRYSSQRQRSIPDQPVPPFQQQPNYIDPAMEPGYQGGVYE
GGSGNPSTSHSVTSPHSQMPLGGAPPSFVPPAFTSPPTFPPEPFLGRPPAPRPFPPVTQS
PHLYGPPVAPPVAGPPVGAPPPLGAPPVGAPPVPGPPVTGPPFLPPENMINYGAHPGPHP
GPLPGAAPLAGPHPPQFPPFQGFTPGTVSQPGEIYSNGVTYYNTQSQQHIPRINLPLQKR
PKAAIPIVPPPERESRKEGGAAQDAAGGTRQDEQGLEQSEQELNPEVAHQEADNPKEGHQ
EPEKIQEEPASVEKMEATVPSPEAPQDQQEDTKEKESSKTVDNHLEDSKPEATSQQETSE
AKPPVDTPVTETAAVPEKEVKAPVVESKPAEQNTSSEELQSPPPVSETPDTAVAAS
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaggaggagacggagaaagctagcgagcaatgacgattccgaggactgttcc
gaggagtcagacgacgagcagagcggccttaggaaatcgttgacaggaagtgatggtgga
gacagtgaatacgagagtgcagatgaggaggaactgggagatgaggaagaggaagatgac
gacgagctcatcctcatgcccgatgggttaggagtgccgggagaggacaacaagccactt
gatgatgatgaagatcgtaaaaatccccagtacatcccaaagaaaggaacgttctatgag
cacgatgaccgaacggctgaagatgatgcagaaaaacctgtcccagaggagccggttgtc
aagaaggaaacagccaagaagaaggtgtggaaggaagatgacagatggaaccatgacaag
tttaatgaatttgatcaagctccaaagtcaagggaggaacttatagctatatatggatat
gatattcgcaatgaagagggtcccccgcgtgctcgccgcaggaggagatatggacgtggc
ccaaacaaatatactcgcaactgggaggatctagatgcttatgcaaagccaacccgagga
ggcactgttcggggaggcatcggtagaggaggaaacaggtcttggactggaagtaggaag
acgctagaaaatgatgaagaatttccagcattgaactcctctttacagaactctaaacag
ttaatggatgatcctcaagctgaacaaaatattcctaattctgagtctccaagaactgac
cagcaaagaccaatccatgatgaccaaatattaggcaatactgatggccacaaacagcag
cagcctcaccaatcccctcagcagcagcatcatcagaagaattcaattgcaagtccacag
atccaggatgtcaggatggaaaaccctggcaggggtagaggtggcagagggcgaggacga
ggggcaggaagaggcaataataggcataatgatgagcgaagtcacaattatcaagacggc
agacctgctggtcgcggaggccggggaggtcaccaacagagaccaccacagcagcaccca
tctcacggcccaagagatatggaagaattagcagttgatatgaagaatattagcgttagt
gcacaaaatcgtgaagaacaattcagaggcaaaaacagaggaggaggaaattcagataat
agacgcaacatggtaccgccacgactccaggaatctgcagcagctgccgcaagtgcgcaa
ggcagaggaaaccggggaggtaatgcatcccccggaggagatgggtcagcctccagacca
aaacgatactcatctcagagacagcgctccatcccagaccagcctgtgcctcccttccag
cagcagcccaactacattgaccctgccatggaacccggctatcagggtggagtgtatgag
ggaggaagtggaaacccgtcaaccagccactcagttacatcacctcactcccaaatgccc
ttaggtggtgctcctccctcctttgttcctccagcctttacatccccacccaccttccct
ccagagcctttcctggggagaccaccggcacctcgcccgttcccgccggtcacacaatca
ccgcacctctatggcccgccagtcgcaccgcccgtcgctggacctcctgtgggcgcgccg
ccacccctcggtgctcctccggtgggtgcacctccagtaccaggccctcctgtcactggc
ccgccattcttaccccctgagaacatgattaactatggagcacaccctggcccccaccct
ggccctctcccaggagctgctccgttagctggcccccacccacctcagttcccgccattc
cagggcttcaccccaggcacagtgtcccagccaggtgaaatctacagtaatggtgtcact
tattacaacacccagagtcagcagcatattcctaggatcaatctgcctctgcagaagaga
ccgaaggctgccatccctatagttccacccccagagagggagagcagaaaggaaggagga
gcagctcaagatgctgctggaggaactaggcaagatgagcaggggctggaacagtcggaa
caagagttgaaccctgaggtggcacaccaggaagcagacaaccccaaggaggggcatcaa
gaacctgagaagattcaagaggagccagcaagtgtagagaaaatggaggcaaccgttccc
tctcctgaggctcctcaagaccagcaagaggacaccaaagaaaaggaaagttcaaaaact
gtagataatcatcttgaagacagtaaaccagaagccacctcacaacaagagacttctgaa
gcaaagccacctgtagacactccggtcactgaaactgcagctgttcccgagaaggaagta
aaggcaccagttgtcgagtctaaaccagcagaacagaacacatcaagtgaagaattacaa
tcaccgcccccagtatcagaaacacccgatacagcagtagcagcttcttaa
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