Penaeus japonicus (kuruma prawn): 122258406
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Entry
122258406 CDS
T07703
Name
(RefSeq) retinoic acid receptor alpha-B-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pja03000
]
122258406
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pja03310
]
122258406
Transcription factors [BR:
pja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122258406
Nuclear receptors [BR:
pja03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122258406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
FHBP_C
Motif
Other DBs
NCBI-GeneID:
122258406
NCBI-ProteinID:
XP_042880268
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MELHSPRFSDFSIHSLMTARSLAEMGDPPGAGWPGPPAHPLHPGLHDPWPLPHHAYARHN
PNMIQMDGWQARQSAVASIPPHLQEQHQHQHLAPHLQHMQYPHPFNTPVKRSSSPLGAMA
RPPSLESGYDSFNSPHLPGATPAARMHPQGQTFANFSPVAPLEGNGATGCYRQEWTGPGH
EVVAADVPEHETPEGCSPDVVQCPPVQTEKALDEAPKPGHKRRRVEEDAVIPCAVCGDKA
SGMHYRVHACEGCKGFFRRVTSRNTRLVCPRNYQCEVTRESRTRCQACRFQGCLRAGMAK
DVNTIPKRGRKRPVSEDDSHSPVSQPSDDLIHTLTSAHHATFSPACHAQQLSEASLWAAE
ADVGVEGRTRAQQFAMMVPGIASLPAVEQQAVLNQAVPEVMILRLASRFVPEHKGFAVPG
GLLVPLTAVVEALGRSLAQKLVRLATFLLYMSIDDTELSLLCGIVTTLPDRLSGDSEALE
ALEEQHDAHLRALQEYELDKRRSKPNALAKILLRLLDVRAIALREAGRLILASRPEQLAG
GDVPAEGTGYNPSLAEYLPEEAAYLEGQATHPHGSYVNNKVEPSQVYQGMPFDHQHQQGR
LQHQLHQHQQPARTHIMHNQQQHQHQPHHQHQQQQHHHQQHHQHHQQQQQQLYYHNPQQD
RQTQHQVMLDREEQQRIMKALHERQHGLHMLPGRQEENLAQEPRQQQCQGEVLSHDRQQQ
QEIQILEENQEDSEG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacagcccccgcttctccgacttcagcatccactccctgatgaccgcccgc
tctctggccgagatgggcgaccctcctggcgcaggctggccaggcccgccggcccacccc
ctccacccaggcttgcatgacccatggccgcttcctcaccatgcttacgccaggcacaat
cctaatatgattcagatggacggttggcaagcgcgccagtcagcggttgcatcaattcca
ccgcacttgcaagaacagcatcagcatcaacatctggctccacacttgcaacacatgcaa
taccctcacccgttcaatacacctgtgaagcgctcgtcctctcccttgggcgccatggca
cgcccccccagccttgaaagcggctacgacagtttcaactccccccacctccctggcgcg
acccctgccgcccgcatgcacccgcagggccagaccttcgcgaatttcagtcctgtcgcg
cccctcgaaggcaacggcgccacaggttgttaccggcaggagtggacgggacccggtcac
gaggtcgttgccgcggacgttcccgagcacgagacccctgagggatgttcgccggacgtg
gtccagtgtcctccagtgcagacggagaaggcgctggacgaagctcctaaacccggccac
aagaggcgtcgggtggaggaggatgcagtcattccttgcgccgtgtgtggagacaaggcc
tcaggcatgcattaccgtgtacatgcttgcgaaggatgcaagggtttcttcaggcgagtc
acgtcgcggaacacccgcttggtttgcccgaggaactaccagtgcgaagtgaccagggag
tcgcgtacgcgctgtcaggcgtgtcgattccaaggatgtcttcgcgcaggaatggccaaa
gatgtgaacacgatcccgaagcgcggccggaagcgccccgtcagcgaagacgactcgcac
agtccggtctcgcagcccagcgacgacctcatccacaccctaaccagcgcacaccacgcc
accttctcccctgcttgccacgcccagcagctctccgaggcgagtctgtgggcggctgag
gcagacgtgggtgtggagggacgtaccagagcgcagcagttcgccatgatggtgccgggg
attgccagcctgcccgcggtcgaacagcaggccgtgctcaaccaggctgtgccggaggtt
atgattctgaggctggcttcgcgattcgtccccgagcacaaagggtttgctgttcccgga
ggactcctggttcctctgaccgccgtcgtagaggccctggggcgctccttggcccagaag
ctggttcgactggcaacttttcttctttacatgagcattgacgatacggagttgtcgctg
ctttgtggcatagtcaccactctgcccgaccggctatctggcgattccgaggccctggag
gctttggaggagcagcacgacgcccacctccgcgccctgcaggagtacgagctcgacaag
cggcgttcgaagccaaacgctctcgccaaaatcctcttgcggctcctcgacgtccgggca
atagccttgcgggaggcagggcgactcatcctggcgtcgcgccctgagcagctggcagga
ggcgacgttcccgcggaaggcactggctacaaccccagtctggccgagtaccttccggag
gaggctgcgtacctcgagggacaggccacgcaccctcatggctcttacgtcaacaataaa
gttgaacccagtcaggtttaccagggtatgcccttcgatcaccaacaccaacaggggcgc
ctccagcaccaacttcaccagcatcagcagcccgcgcgcacccatatcatgcacaaccaa
caacagcatcagcaccagccgcatcaccagcaccaacagcaacagcatcatcaccaacag
catcaccaacatcaccagcaacagcagcagcagctatactaccacaaccctcaacaagat
cgccaaactcagcaccaagtaatgctggatcgcgaagagcaacagcggatcatgaaggcc
ctgcacgagcgccagcatggcctgcatatgttgccaggacgccaggaagagaacctggca
caggagccgcgtcagcaacagtgtcagggcgaagtcttatctcatgatcgtcagcaacag
caagagatccaaattctcgaagaaaaccaagaggattccgaaggttga
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integrated database retrieval system
