Penaeus japonicus (kuruma prawn): 122259016
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Entry
122259016 CDS
T07703
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122259016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122259016
03036 Chromosome and associated proteins [BR:
pja03036
]
122259016
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122259016
Coactivators
SAGA/TFTC/STAGA complex
122259016
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122259016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
ELP3_N
Peptidase_C41
Motif
Other DBs
NCBI-GeneID:
122259016
NCBI-ProteinID:
XP_042881393
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MMMLYCRLPLERFLGLVGKEVANERHLFAFEVGAARGAGGGWRDVTGGGACAAQCWGEAG
TAKMATSNSLDQVSSADVDHSAVTDIVGSLETPLTAPAKTASNQAVDVSAEVGVSVGVTG
TVQAKTNGGKVGCRGVPAVSGGSAVLAGKVVAPAGVSVAAASPHILQSAGVPSGVLKGDC
GAGAALQGGPRLPHNALNNGAAGVKPVYGVGPTPMTGGAQGTQVVVNGGVSGGAHTGSPQ
ASLQAQPALKGLTKVVTTAGAAGQPAVIMSKPGTVTAVPSTGTPGTVPIPQGMQILNMRP
SQAIKTTQGTTTLAPRMILSPAQVLPGMRPGQPGQITLGTLQGLPPGAQGHLLVKTENGQ
LQLLRVNAAAAPPGQLPTSVTTTTTLQQAPTTAYRFQQPQAGTVAVRSVMVTSAAARPNT
IILQSQASNTNAISTGTTTTTMATQAGTIVNPTTVPVTPGTTVAGTVVPSTPTTAAAPVT
QTAQPAATGGSQTISAESAKTKCKNFLATLLKLANEQRATVARNVRNLIQGLIEGRVEPE
VFTEELQKDLNSSPQPCLVPFLKKTLPYLRVSLARGELTIDGVRPPPLSAVTPVTGVTTV
IPAMSVARPGAPTTSGTVRTIAPAAATATTVVHRPVNATPTPARVVGQQQVQQVRVQGGK
TVVTTVRQNTTAASSPASTTTNTVPTATKTITVNKTIPTKDKEKSNKNQLFTYSSSYSSS
GVADDDINDVAAMGGVNLGEESQRILESTGFVGTQIRSCKDENFLLNTPLTQRIKQICSK
YGLEEAPKDVVALVSHATQERLKTIVEKLAVISEHRLDIIKSDSRYEVVQDVKGQLRFLE
ELDKLEKKRKEEQEREMLMRAAKSRSKSEDPETAKLKAKAKEMQRVEMEEMRQRDANRTA
LNALQGPKKKPKLDLSAMDDGATFSGTFSQKYMPLRPRIKRVNLRDLMFLMEQEKELCKS
TLLYRSYLK
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgctgtattgtaggttgcccttagagcgtttccttggccttgttggaaaggaa
gtagcaaacgagcgtcacttgtttgcgtttgaagttggcgcggcgcggggggcgggtggt
gggtggcgtgacgtcacgggcggcggcgcatgcgcagctcagtgttggggtgaagctggg
acggctaagatggcgaccagtaacagcctggaccaggtgtcgagtgcagacgtggaccac
agtgctgtcactgacattgttggatcacttgagacacctttgaccgcaccagcaaaaacc
gcatcaaatcaagcagtagatgttagtgccgaggtgggcgttagtgtgggcgtgactggg
actgtgcaagctaaaacaaacggtggtaaagtagggtgtcgaggggtcccggcggtcagc
ggtggctcagcagtgttagcaggcaaggttgtggctcctgctggcgtaagtgtcgctgct
gcgtcgccacatatcctgcagagcgcgggggttccgtctggggtgctgaaaggggactgt
ggtgctggcgccgccctccaggggggtccccgcctcccccacaacgccctcaacaacgga
gctgcgggcgtgaagccggtgtatggggtgggccccacgcccatgacaggtggcgcccag
ggcacgcaggtggtggtgaacgggggtgtgtcagggggggcccacacaggctcccctcag
gccagcctgcaggcccagccagctctcaagggactgaccaaggtggtgaccacggctgga
gccgcggggcagcccgctgtcatcatgtccaagccaggcacagtgaccgctgtgccctcc
accggcacccccggcacagtgcccatcccccagggcatgcagatcctcaacatgcggccg
agtcaggccatcaagaccacgcagggcactaccactctcgcacccaggatgatcctcagc
cctgcgcaggtcctcccagggatgcggccaggacagcccgggcaaatcaccttaggcaca
ctacaagggttgcctcccggtgctcagggacacctgttagtcaagacagaaaatggtcag
ctccagttgttacgtgtcaatgctgccgctgccccaccaggtcagctgcccaccagtgtc
acgacaacgactacacttcagcaggcccccacaacagcatacagattccaacagccgcag
gctggcacggtcgctgtgaggtccgtgatggtgacgtcagcagccgcacgccccaacacc
atcatcctccagtcacaagccagtaataccaatgccatatccacggggacaaccaccacc
acaatggctacacaagcaggtactattgtgaaccccacaacagtacctgtcacccctggc
acaacagtggcaggtacagtcgtaccctcaactcccaccacggctgcggctcctgtcacc
cagacagctcagccagctgcaacaggaggctctcaaactatctcagcagaatctgcaaaa
acaaaatgtaaaaactttctggcaacattactgaaattggcgaatgagcagcgggcgact
gtggcacgtaatgttcgaaatctgattcagggcctcattgagggaagagtggagcctgaa
gtcttcacagaggaacttcaaaaagacctcaattcctccccacagccttgccttgttccc
ttcctcaagaaaactttgccctacctacgtgtatccctagcgcgtggagaactaaccatt
gatggagtacggcctccaccactatcagcagtcactcctgttactggagtcaccacagtc
atacctgcgatgtctgtcgcccggcctggagctcctacaacttctgggacggttcggaca
attgcgcctgctgctgcaacagccacaactgtagttcaccgaccagtcaatgcaactccc
acacctgccagagttgtggggcaacaacaggtacagcaagttcgtgttcaaggtggcaaa
actgtggtaacaactgttaggcagaatacaactgctgccagcagtcctgccagcactact
accaacacagtacccacagcaaccaaaactataactgttaataagacaattcctaccaaa
gacaaagaaaaaagtaacaaaaatcagctcttcacatatagcagttcctattcttcaagt
ggggtggctgacgatgatatcaatgatgtggcagccatgggaggggtcaacctgggagag
gagtcacagcgaattctggaatcgacaggatttgtggggacacaaatcaggtcatgtaaa
gacgaaaatttccttcttaacactccattgactcagagaataaaacagatatgttcaaaa
tatggtttggaagaggctccaaaggatgtcgttgccttggtgtctcatgccacacaagaa
agactgaaaactatcgttgaaaaattagcagtcatttctgaacacaggctagatataatt
aagagtgacagtagatatgaagtggtgcaagatgtcaagggccagcttcgtttcctagag
gagctggacaagttggagaagaagcgcaaagaggagcaggagagagagatgctaatgcgg
gcggcaaagtcacggagtaaatcggaggatccagagactgcaaagctgaaggccaaagca
aaagagatgcaacgtgtggaaatggaggaaatgagacagcgagatgcaaatcggactgct
cttaatgcacttcagggccccaagaagaagccgaagctggacttatcggcaatggatgac
ggtgcaactttcagtggaactttctcccaaaaatatatgccactacgaccacggatcaaa
agggtgaatttgcgtgatctcatgttccttatggagcaggagaaggagttatgcaagtcc
acattactgtaccggtcttacctcaagtag
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integrated database retrieval system
