Penaeus japonicus (kuruma prawn): 122260298
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Entry
122260298 CDS
T07703
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pja03009
]
122260298
03012 Translation factors [BR:
pja03012
]
122260298
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122260298
5.6.2.5 RNA 5'-3' helicase
122260298
Ribosome biogenesis [BR:
pja03009
]
Eukaryotic type
Other ribosome biogenesis factors
122260298
Translation factors [BR:
pja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122260298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
R3H
zf-AN1
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
122260298
NCBI-ProteinID:
XP_042883437
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MFAKSFCLHLSRTLVPPFAERSLVLVDTAGCDCLELDTAEEQSKGNEGEAIIVSHYVRAL
LEAGLREEDVAVITPYNLQVELVRGLLREDHPKVEVRSVDGFQGREKEAVVMSLVRSNKQ
GTVGFLSENRRLNVAVTRARRHLAVVCDSETVGKDPFLKGFLDYMVEHALVRTAYEFQHE
METTQVATPESISLRPKDEAKDKKSDSKNKKSNAKRDGKEGPAKRKGDTKPKYKPPTEEE
NLERRQKYESLIRDFINSTSNVHEFPPDLNSFERHLIHQICEAEGLVHQSQGEGSERHIV
IQKQKTGESSEASKRDVKDEEKEEKKEKDVSPVNVEEGEKEDQHTEEDEEEDEDEDEDEQ
EEKEDGNAESTEEKEKKEIPTVNGGAIPKLKNLSLNESKPRIAFINGMYQEVTGGHKLSD
TKGDNSKLGDKKGKENEKSTVRCQSCGKDVLQQNFSVHSAQCERKMRARKEEEERRKANQ
KSTKKKDGRRENKSGKGKKEEEEEEDFDSLIARFTKEDNTCSQPNCKTPTTVIFQQCPFC
RKTFCLTHHMAEVHGCGDEARRHARAMVIKEGVLYPGSGIPSKKPKESKRKLLQKNLDKK
LNDLTSQRQSKKPSKDKDKGKGPK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaaatccttttgtctgcacctctcacgcacccttgtcccaccctttgcagaa
cgctccctggtgttggtggacacagcagggtgtgactgtctggagctggacacggcagag
gagcagagtaagggcaacgagggggaggctatcatcgtcagccactacgtcagagctctg
ctcgaggccgggctacgtgaagaggatgtggccgttatcacaccgtacaatctccaggtg
gagttggtgcgcggtctgctgcgggaggaccacccgaaggtcgaggtgcgctccgtggat
ggcttccaggggcgcgagaaggaggctgtggtcatgtccctcgtgcgatccaacaaacag
ggcactgtgggcttcctgagtgagaaccgccgtctgaacgttgctgtgactcgtgccagg
cgacacttggctgtagtctgtgactcagaaacagtcggcaaggatcctttcctcaagggc
tttttggactacatggtggagcatgcccttgttaggacagcttatgaatttcaacatgaa
atggaaacaacccaagttgcaactccagaaagcatttccttaagacccaaagacgaggcg
aaagataaaaagtccgactcgaagaacaaaaagagcaatgctaaaagggacgggaaagaa
ggtccggcaaagcgaaagggggacacgaagcccaagtacaaacccccgaccgaagaagag
aacctagaacgacggcagaagtacgagtcgctgatcagggatttcatcaattcgacgagc
aacgtccatgagtttccaccggacctgaattccttcgagaggcacctgattcaccagatc
tgcgaggcggaggggctcgtccaccagagtcaaggggaggggagcgaacggcacattgta
atccagaagcaaaagacgggggaaagctccgaagcaagtaagagggacgtgaaagatgag
gaaaaggaggaaaagaaggagaaggacgtgtcaccagtgaatgtggaggaaggagagaaa
gaggatcaacatacggaagaggatgaggaagaagatgaagatgaagatgaagatgagcag
gaagaaaaagaggatgggaatgccgaatccactgaagagaaagaaaagaaagaaattccc
acagttaacggaggtgccatccccaagctgaagaacctgagtctgaatgagagcaaacca
cgcatagcattcatcaacgggatgtaccaggaggtcaccggcggacacaaactcagcgac
acgaaaggcgataatagcaagttaggagacaagaagggcaaagagaatgaaaagtcaacg
gtacgatgccaaagctgcggtaaagacgtcttacaacagaacttcagcgttcatagtgcg
cagtgcgagaggaagatgagggcgaggaaggaggaggaggagaggaggaaggcgaatcag
aaaagcacaaagaagaaggatggaaggagggaaaacaagtcaggaaaggggaagaaggag
gaagaggaagaggaagattttgatagtctgattgctcgcttcacaaaggaggacaataca
tgctcacagcccaattgcaagaccccaaccaccgtcatcttccaacagtgtccattctgc
aggaagaccttctgcctgactcaccacatggcggaggttcacggctgtggggacgaggca
aggcggcatgcgagggcgatggtgataaaagaaggagtactgtaccccgggagtgggatc
ccgtcaaaaaagccgaaagagagcaagcgaaagctgttgcagaagaacctggacaagaag
ttaaatgacctgactagccagagacagagcaagaagccaagtaaagataaggacaaaggg
aagggcccaaagtga
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