Penaeus japonicus (kuruma prawn): 122260468
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Entry
122260468 CDS
T07703
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03082
ATP-dependent chromatin remodeling
pja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122260468
03083 Polycomb repressive complex
122260468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pja03036
]
122260468
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122260468
Histone modification proteins
HAT complexes
HATB complex
122260468
HDAC complexes
Sin3A-HDAC complex
122260468
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122260468
PRC2.2
122260468
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122260468
Heterochromatin formation proteins
Other heterochromatin formation proteins
122260468
Chromatin remodeling factors
NuRD complex
122260468
NuRF complex
122260468
NuRF complex (fruit fly)
122260468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
122260468
NCBI-ProteinID:
XP_042883679
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MTDKEAAKVGDGGGPAPVCAVPDLPTTVAVAEVTPVTRLQDTFDDAVEERVINEEYKIWK
KNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLILGTHTSDEQNHLLIASVQ
LPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTP
SSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW
DINATPKENRIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTNKP
SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEVFQVQW
SPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPN
EPWVICSVSEDNIMQVWQMAENIYNDEEPETPASELESAAS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaggaagccgccaaggtaggggatggtggtgggcctgcgcctgtgtgtgcg
gttcccgacctcccgacgacagtggcggtggctgaggttacacctgtgacccgcctgcaa
gatacctttgatgatgcagtggaggagagagtcatcaatgaggaatacaagatatggaag
aaaaacacccccttcctctatgacttggtgatgacccatgccttagaatggccctctcta
actgctcagtggctgcccgatgttacaagacctgatggcaaagatttcagcattcaccga
ctgatactaggtacacacacaagtgatgaacagaatcacctcctcattgcctcagttcaa
ctccccaatgaggatgcacagtttgatgcctctcactatgacaacgaaaaaggagagttt
ggtggttttggctcagtcagtggtaagattgaaatagagattaaaatcaaccatgaggga
gaagtaaaccgtgctcgctacatgccccaaaacccatgtgtcatagccaccaaaaccccc
tcaagtgatgtccttgtctttgactacacaaagcatccatcaaaaccagatccttctggg
gagtgccatcctgacctgaggttacgtggccatcagaaggaaggatatggcctgtcttgg
aatcctaatctgaatgggtatctcctgagtgcatcagatgatcatactatctgcttgtgg
gacattaatgcaactccaaaggaaaacagaataattgatgcaaaaacaatattcacagga
cacactgctgtggtggaggatgttgcctggcacctcctccatgagtcactatttggttca
gtggctgatgatcaaaagctcatgatttgggacactcgtgcaaacaacactaacaagcca
tcacacacagttgatgcccatacagcggaggtgaactgcctctccttcaacccttactct
gaatttattcttgccactggaagtgcagacaagacagttgccttgtgggacctgcgcaac
ctcaagctgaaactccactcatttgagtcgcacaaagatgaagtcttccaggtacaatgg
tcaccccacaacgagacaattctggcaagttcaggcactgaccgtcgcttgcatgtgtgg
gatctgagcaagattggtgaggaacagagtgctgaggatgctgaagatggaccacctgaa
ttactgttcatccatggaggccacactgccaagatctcagacttctcctggaaccctaat
gaaccatgggttatctgctctgttagtgaagacaatatcatgcaggtgtggcagatggca
gaaaatatctacaatgatgaagaaccagaaactccagcctctgagctcgagtctgcagca
tcttaa
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integrated database retrieval system
