Penaeus japonicus (kuruma prawn): 122260532
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Entry
122260532 CDS
T07703
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122260532
03036 Chromosome and associated proteins [BR:
pja03036
]
122260532
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122260532
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
122260532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
Spt6_S1
HHH_3
Tex_YqgF
Tex_N
S1
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
122260532
NCBI-ProteinID:
XP_042883795
LinkDB
All DBs
Position
Unknown
AA seq
1882 aa
AA seq
DB search
MSHFIDSEAEESEEEEEEYGEEEKKKLKKLKKSIEDSSEEEDEDEEMMQEENKGFINDDD
EEEEDEGGSDSEVEGKRKRDDDDDDDLDADNLDEDDLDLIEENIGVKLDRKKKFKRLKRI
EDEDSDAEEEDVQGQIRKEIFEGSGDEDDDEAAPAPPVLQQPETYASEEEEEESDGEGSF
IVDDDGKPIAKTKKKAIFEDEGLEAARDIFGCDFDYGEFEQYEDYDEAEDEEEEEDDDYE
EDEEVEGRERRHRRKERRKPIKKSIYEVFEPSELERGHLTDQDHEIRKSDVPERFQLRQI
PVTRTRGEGDDRATDKELDQEAKWIYHHAFFKPYISNQEGRDEAKLRSRRDMNMIQKIYN
ALDLMRNSTCEVPFIAFYRKEEVQPELNIHDLWKVYRWDEKWCQLKRRKENLRSRFQMMS
EFQGDLIMKDLDAPLPENVRMLKEEDIERIDELETSEQFNDCYKQFLLYYGKELPDMHEH
MKAKNKERQNTVRTTRVVKVLRKVKRKKKKKKKGFVIEDDDDEDDQEKDKEAEKDKENEV
EKDKENEAEVDKDDEAEKDKEKEKEKDTDEEGEDGELDKEKEKEKEKQKEKEKEDGEEDD
DDDDEEEEEVETEVETEVEEEMEEEQQHATEDTDALKKAVRRHEYELLKKAGIEALTKKF
GLTPEQFGENLRDNYQRFDCEQCQEDPLKEAEEHISKMCSTPERVLEAAVRMVGWQLACE
PLVRRTVREAYFERARISARPTPQGLKIVDEHHPLYPIKYLKDKPVTDLQGDQFLRLKCG
VEDKLMTISLSDTIEGNTSLSYLDEMKQLYYRDEFSQVVQDWNDLRGRAVTFAFKRIIED
LKRELSQRLLQESKDHVIEQCCSKLYNWIKIAPYNPGDFSDEDEDDWDTAKGFRVFSIAY
VPDLSQAAFGCCIDIDGDCCEYIRLPHLLKRRNAYNERDALAKENDIRRMQEFIIRRKPH
VVAVSGESREGFMVKEDLIQILKDLEEQEQFPKINVEIIDNDLAHIYAMSKKGEADFLDY
PPLLRQAISIGRRIQDPLIEFSQLCNADDELLNIKFHSLQDQINNAELLDALYTEFVNRT
NEVGVDLNRAVAYPYTQNLVQFVCGLGPRKANLLIKNMKQNNQRLENRNQLVVNFHMGPK
VFINCAGFIKIDTNALGDSDNYIEVLDSTRIHPEAYDWARKMAVDALEYEDEEGKPAEAL
EEILETPERLSELDLEAFATELQNQGFGKKNTTLYDIRHELNHRYKDFRMPFRSPTPEEI
FNILTKESPETFYVGKLVQVTVTNFIHRKPRGDQLDNANPVRNEDTGLWQCPFCLKNDFP
ELSEVWNHFDAGDCPGQAIGIRARLDNGISGFISIKNLSDKTVTNPAERVKRNGIVLCRI
MKIDPEKFSVELTSRTSDLQDRDGKWKAPKDAYYDYETEEKDMNSSRKKMDKKKTQYQKR
VIAHPSFRNIDYNEAEKVMQHLEQGEVIIRPSSKGVDHLTATWKVTEGICQHIDIREQDK
QNDFSLGQKLWIGNEEFEDLDEIIARYISPMAINVRQILEYKYYKESVMGDKNKASEILK
EDKKKNPKTIPYLFSPRKDLPGKFMLSYLPRVKVIHEFVTVTPEGFKFRGRMQHPNLASL
LKWFKVNFRRPAPSMGATPGMMSTRTPYMGGTTPNLMGVDASTIQKVAQNLNPHMLHNLS
QAATNTPYGAHTPGAFSQGYSNYANTPYTPSGQTPFMTPYATPGPSTTPRYSGSQTPSYS
SVGNRTPSHRPSTGHGSQPSRSTPSASSRSEQMDWKMAAAAWVQAKGGSSGRDAGRSTPR
HHDGGRSTPRYSESRDSRYPSSSGYPDDGSRRTPRYDDRTPRPYHDYDNPRATPRSARST
PKTIHSPTNMSIGGDQTPLYDE
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacttcatagactctgaggctgaggaaagtgaggaggaggaggaggagtatggc
gaggaagaaaagaagaagctaaagaagttgaagaaatccatagaggactcgtcggaggag
gaggacgaagatgaggaaatgatgcaagaagaaaacaaaggttttatcaatgatgatgat
gaagaggaagaagacgaaggggggtcggacagcgaggtggaagggaaaagaaaaagagat
gatgacgacgacgatgacttagatgcggacaacttggatgaagacgatcttgatcttatt
gaagaaaacataggtgtgaaactagacaggaagaaaaaatttaagcgtctgaagagaata
gaggacgaagactcagatgccgaagaagaggatgttcaggggcagatcaggaaagaaatc
tttgagggatcgggtgatgaggacgacgatgaggctgcacccgccccccctgttctccag
cagcctgagacctacgcctcagaagaggaggaggaggaatctgatggcgaagggagcttc
attgtggacgatgatggcaagcccatcgccaagacaaagaagaaagccatctttgaggat
gagggtctcgaggctgcaagagatatcttcggttgtgacttcgactacggagagtttgag
cagtatgaagattatgatgaagctgaagatgaagaggaagaagaggatgacgattatgaa
gaagacgaagaagttgaggggagagagagacgacaccgaaggaaggaacgcaggaagcct
atcaagaaatccatctatgaggtctttgagcctagtgaacttgagcgaggacacctcaca
gaccaggatcacgagattcgcaaatcagacgtccctgaaaggttccaactgcggcagatc
cccgtaacacgcacaagaggagagggtgatgaccgtgccacagacaaagagctggatcag
gaggccaagtggatatatcatcatgcattcttcaagccttatatctcaaaccaggaaggg
cgtgatgaagcaaagctccgttcccgtcgtgacatgaacatgatccagaagatatacaat
gcccttgacctgatgaggaattccacatgtgaggtgccattcattgctttctacaggaaa
gaggaagtccagccagagttgaacattcacgatttatggaaggtctaccgttgggatgaa
aagtggtgtcagctgaaacggcgaaaggagaacctgcggtcaaggttccaaatgatgtca
gaattccagggcgatctgatcatgaaggacctggatgctccccttccagagaacgtgagg
atgctgaaggaggaggatattgagagaatagatgaattagagacctctgagcagttcaat
gattgctacaagcagttcttgctctactacggaaaggagctgcccgacatgcacgagcac
atgaaagccaagaacaaagaaaggcagaatacagtacgcactactagggttgtgaaggtt
ctaagaaaggtgaagagaaagaaaaagaaaaagaagaagggtttcgtcatagaagacgac
gacgatgaagatgatcaagagaaggacaaggaagctgaaaaggacaaggaaaacgaagtg
gaaaaagacaaggagaatgaggcagaggtggacaaagatgacgaggcagagaaggacaag
gaaaaggagaaggagaaggacacagacgaagaaggggaagatggcgagctagataaggag
aaggagaaggagaaggaaaagcagaaagagaaagagaaggaagatggagaggaggatgac
gacgacgatgatgaagaggaggaagaggtggagacagaagtggaaactgaagtggaagag
gaaatggaggaagagcaacagcatgctacagaggatacggatgcactgaagaaagcagtg
aggcggcatgaatatgaacttcttaagaaagctggcattgaggcattgaccaagaagttt
ggtctgacacctgagcagtttggtgaaaatttgcgtgacaactaccagaggtttgactgc
gaacagtgccaggaagatcccctcaaagaggctgaggagcacatctcaaagatgtgttct
actcctgaaagagtgctggaagctgctgtgaggatggtcggatggcagttagcctgtgag
ccccttgtccgtcgcacggtgcgtgaggcctattttgagcgagcaaggatcagtgccaga
cccacccctcagggcctgaagatagtagatgaacaccacccactctatcctatcaaatac
ttaaaggacaaacctgtcactgacctgcagggagaccagttccttaggctaaagtgtggt
gtagaggacaaactcatgaccataagtttgtctgacaccattgagggcaacacctcactg
agctacttggacgaaatgaagcagctgtactatcgggacgagttctcccaagtggtccaa
gactggaacgacttgaggggtcgagctgtgacctttgccttcaagaggattattgaggac
cttaagagagagctgtcccaaagactgctgcaggaatccaaagaccacgtgatcgagcag
tgttgcagcaagctctacaactggatcaagatcgctccttacaaccccggcgacttctcc
gacgaggatgaggatgactgggacaccgccaagggcttcagggtcttctctattgcctac
gtgcccgacctctcgcaggctgcattcggatgctgcattgacatagacggagattgctgc
gagtacatccgccttcctcacttgctcaagcgacgcaatgcctacaatgagagggatgct
cttgccaaggaaaatgacatcaggcggatgcaagagttcatcattaggcgtaaaccgcac
gtagtggccgtcagtggagagtccagggaaggcttcatggtcaaggaagacttaatacag
attcttaaagatctggaggagcaagagcagttccccaagattaatgtagagattattgac
aatgacttggcccacatctatgccatgtccaagaagggtgaggcggatttcttggactat
ccccctcttctgcgacaggccatctccattggacgccggatccaagaccctctaatcgag
ttctcacagttgtgcaatgctgacgatgagttgctcaatataaagttccattcactgcaa
gatcaaataaataatgctgaactccttgatgcattgtacactgaatttgttaatcgtaca
aatgaagttggtgtagacttgaatcgtgctgtggcttacccatatactcagaacttagtg
caatttgtatgtggtctgggacctcgtaaagctaatcttctcataaagaacatgaagcag
aataatcagcgattagagaatcgtaatcagttggtggtcaatttccacatgggtccaaaa
gtatttattaattgtgctggattcattaagattgacaccaatgctttaggagacagtgat
aactatatcgaagttctcgattcaactcgtattcatcccgaggcatatgactgggcgagg
aaaatggcagttgatgccttggagtacgaggatgaggaaggcaaacctgcagaagctctg
gaagaaatcttagaaactcctgagagactgagtgaattagatctagaagcatttgcaact
gaactccaaaaccaaggctttggtaagaagaatacaaccttgtatgacatacgacatgag
ttgaatcacagatacaaggacttcaggatgcctttcagatctcctactcccgaggaaatc
ttcaacatcctgaccaaagagtccccagaaacattctacgttgggaagctggtgcaagtg
acagtaactaatttcatccaccgaaaaccaagaggagatcagctcgataacgccaaccca
gtaagaaatgaagatacgggtctctggcagtgtccgttctgcctgaagaatgacttccct
gaacttagtgaggtgtggaaccattttgatgcaggcgactgtcctggccaggcaataggc
attcgtgcgcggttagacaatgggatatctgggtttattagcattaagaatttgtcagac
aagacggtgactaatccagcggagagagtgaagaggaatggcattgtgttgtgtcggatc
atgaagatcgacccagagaagttttcagtcgagcttacgtcccgaacctcagaccttcag
gaccgcgacggcaagtggaaagcgcccaaggatgcctactacgactatgagaccgaggaa
aaggacatgaatagtagtaggaagaagatggacaagaagaagacacagtaccagaagcga
gtcattgctcatccctccttcaggaatattgattacaatgaagccgagaaggtcatgcaa
caccttgagcaaggagaggtaataattcggccctcgagtaagggcgtcgatcacctgacg
gcgacgtggaaggtcaccgaagggatctgccaacacattgacattcgggaacaggataag
cagaacgacttctctttgggtcagaagttgtggattggcaacgaggaatttgaggattta
gatgaaatcattgccagatacatttcgcccatggcgataaacgttcgccagatactggag
tacaagtactacaaagagtctgtcatgggcgacaagaacaaggcctccgagatcctgaag
gaggacaagaagaagaacccgaagacgattccctacctgttttcgccgaggaaagacctt
ccgggcaaattcatgctctcgtacctgccgagagtgaaggtgatccacgagttcgtcacc
gtgacgcccgagggcttcaagttcagagggaggatgcagcatcccaatctcgcctccctt
ctcaaatggttcaaggtgaacttccggcgtcccgcgcccagcatgggggcgacgcccggc
atgatgtctacacgcacaccttacatgggcggaacgacgcccaacctcatgggcgtcgac
gcctccacgatccagaaggtggcacaaaacctcaaccctcacatgctgcacaacctgtct
caggcagctacgaatacgccctacggagcgcacaccccgggggcgttctcgcaaggctac
tcgaattatgccaatactccttacacgccctctggccagacgcccttcatgacgccctac
gccaccccgggcccgtctacgacccctcgctacagcggctctcagacgccgtcgtactcg
agcgtgggcaaccgcaccccgtcgcaccgcccctccaccggccacggcagccagccctcg
cgctccacgccctccgccagcagccgctccgagcagatggactggaagatggcggccgcc
gcctgggtgcaggccaagggcggcagcagcgggcgcgacgccggaaggtcgaccccgaga
caccacgacggaggccgaagcaccccgcgctactccgagtctcgcgactcgcggtacccg
tcgagctccggctaccccgacgacgggtctcggcgaaccccgcgatacgacgaccgcacg
ccgcgcccctaccacgactacgataacccccgcgcgacgcctcgctccgcgcgctccacg
cccaagaccatccactcgcccaccaacatgagcatcgggggggaccagacgccgctctac
gacgagtag
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integrated database retrieval system
