Penaeus japonicus (kuruma prawn): 122262679
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Entry
122262679 CDS
T07703
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122262679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122262679
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122262679
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122262679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122262679
NCBI-ProteinID:
XP_042886707
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MAVEFVDLGDSVKCIMGSLGGTVARSIESRGIASGPSVGSLVSSGSGSSGGSSLAALSSA
VAATHNTNSLFMANSIQAATQQRAVTDMLRHMQGLGNRSITGIVGRPYGSGGNSMMGLHS
NFGGDSAPPPLDLSEFPSLSSRSTDNSQPNPMAGRQPYVGMVKQPTPETSEFTMSSEDFP
ALPGTQSAPTGKIFSPFSDDGGFSNNDKKSTSTASSESTSDFSLRVAEKRESMRRGIQTR
ADGKVTNIPGDMVTDQFGMVGLLTFIRAAETDHQLVSLALGSDLTTLGLNLNSPENLYPN
FGGPWAETPCRPQDIDYHVPQEYLTNQQIRGKLAPVKFDRYGEDLLFYMFYSNAGDVLQI
LAGSELYNRDWRYHKDERVWITRAPGMAPVEKGPNFERGTYFYFDAQNWRKVPKEFHLEY
DKLEERPHIPGGITSTSSTL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggagtttgttgatctcggagattctgtcaagtgtattatggggagtttaggc
ggcactgttgccagaagcatcgagagtcgtggtattgcaagcggtccgagcgtcggaagt
cttgtcagcagtggcagtggtagctcaggaggttccagcctggcagccctgtcctcagct
gtggcagcaacacacaatacaaactctctctttatggcaaacagtattcaggcggcaaca
cagcagcgagcagtcaccgacatgcttagacatatgcaaggtctaggaaaccgtagcata
acgggaattgtagggaggccctatgggagtggcggcaatagtatgatgggtctccacagt
aattttggtggggactcggcaccccctccattggacctgtcagaattcccctccttatct
tcccgaagtaccgataactcccagcctaaccctatggctggaagacaaccttatgtggga
atggtgaagcagccgaccccagagacctcggaattcactatgagcagcgaggacttcccc
gcattgccgggaactcaatctgctccaactgggaaaatcttttcaccgttttcagatgac
ggggggttctcaaacaatgataaaaagtctacctcgacggcaagttcagagtcaacgtcg
gacttctccctacgggtagcagagaagagagaatctatgaggagagggattcagactcgt
gccgacggtaaagtaacaaacatacctggagacatggtgacggaccagttcgggatggtg
ggtcttttaacgtttatcagagcagcagaaacggaccaccaactcgtatcattggcatta
gggtcagacttaaccaccttagggttaaatctgaattcccctgaaaatctctaccctaat
ttcggtggcccttgggcagagaccccgtgccgtcctcaggatatagattatcatgttccg
caagaatacttaactaatcagcaaatcagagggaagttagcacctgtaaagtttgacaga
tacggagaggacttgctcttctacatgttttactccaatgcaggagatgtactacaaata
ttggctggttcagagctgtacaaccgggactggagataccataaagatgaacgagtatgg
ataacgagagccccgggcatggcaccggtggagaagggtcctaactttgaacgtggaact
tacttctattttgatgcccagaattggaggaaagtgccaaaggaattccaccttgagtac
gacaagttggaagagcgcccgcacatccctggtggtatcacatcgacttcatccaccctg
tga
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