Penaeus japonicus (kuruma prawn): 122263117
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Entry
122263117 CDS
T07703
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122263117
09123 Folding, sorting and degradation
03018 RNA degradation
122263117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122263117
03041 Spliceosome [BR:
pja03041
]
122263117
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122263117
mRNA degradation factors
5'-3' decay
Lsm complex
122263117
Spliceosome [BR:
pja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122263117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RHH_1
Arc
Motif
Other DBs
NCBI-GeneID:
122263117
NCBI-ProteinID:
XP_042887373
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGNLVSCDNWMNINLKDVICTSRDGDKFWRMPECY
IRGSTIKYLRLPDEVIDLVKEEVIARGRGRGENRGRGGPGRGRGGPGRGGFGGRGRGGPP
GGGRGGPGRGGMKKKEGYK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctctccttgctgaagacggctcagaatcatcctatgctggtggagttgaag
aatggcgaaacttacaatggaaatttggtctcatgtgacaactggatgaatataaaccta
aaagatgttatctgcacatcgagggatggtgacaagttctggagaatgccagagtgctac
attcgaggttcaactattaagtacttacgactgcccgatgaagtgattgatttggtcaag
gaagaagtgatagccagaggccgcggtcgaggtgaaaatagagggcgtggcgggccagga
agaggtcgtggaggtcctggcagaggtggttttggaggccgtgggcgtggtggtccgcca
gggggaggacgtggaggcccaggacgtggaggcatgaagaaaaaagaaggatataaataa
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integrated database retrieval system
