Penaeus japonicus (kuruma prawn): 122263724
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Entry
122263724 CDS
T07703
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122263724
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
122263724
3'-5' decay
Other 3'-5' decay factors
122263724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
PAM2
ResIII
UvrD-helicase
AAA_22
zf-C2H2_jaz
PhoH
T2SSE
Helicase_RecD
MOV-10_Ig-like
eIF-6
Motif
Other DBs
NCBI-GeneID:
122263724
NCBI-ProteinID:
XP_042888245
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MEKGRKGNSETSENTGSSAILGRHKWKKKRIPEMQGVRPKSKSPHGDAHPEVADDMPASD
PVSKGEELAVALRSGVRREKSFEKERSPTGRLHCSYCNVYFSGKLELQAHCRGQDHQTTI
MSDEGRDWKHRPPPRGLGADEYALCSTYKDTHNCRLADQCVGAHSDAELLEWQERFEYRS
MKLERAREKQLHGATYADQLLERLSQAQHQDALISEKIDGVLVNVSMEPNLRVSQKPSQH
EWTISLRPSTPLRVVSLLHDAHRTHFAISEVTQIDNHRHIHKSYEPENNQEWINPDMEAV
LPPDTPVQEYKVTILFKTAIYGTFRQAVIFDFGTEPVLMQRLCVDVIPVEDLSAMEETKR
TILTRSERWCEENVDIIHFEPKPHELSDHDKSILAMFPPPTNENFVFTQSSMQKVPTRNN
YCSRLHDLLHIEELAQFDLMARFNIKTTLQIVNTYMLLPSTASTAKYSRPGELFAKLELS
SEISEDSHHGRLVLSNCNTILVSPVSEESETKETLKQESAASVSPSVGKKEGESEEKEIL
KPKRRIYEVLIEDKTKKEIYLRFSEVAVSELHLAHDEEVTVEVQFQLNRLPLCEMHSALD
RLPSLDIVFPDMTLEPTIPWSPINVSLCRQWGEGLDMRLNPKQKEALVAITAPHGLILPP
ILIIGPYGTGKTYTLAQGIKQILQQPDTRILICTHSNSAADLYIKDYLHPYVQSGHEEAK
PLRIYYRNRWVTTVHTSVQEYCLIEMDQGVRKFVMPTEKEILAHRVIVATLNTSRYLASL
NLEKGVFTHILIDEAAQAMECEALTPMALVRPDTRIVLAGDYMQLSPEVFSPFCEERGLG
MSLLERLYDLYPADSPCKIMLVENYRSHSAIIKYTSDLFYEGRLVASGKQTAHPKFHPLT
FFTARGEDFQDPNSTAFYNNSEVYEVCEQVGEIISHWPKKEWGPVGENSIGVVTPYADQM
VRIRAELRKRKLYKINVERVLNVQGKQFRVIVLSTVRTRHTCKPGAEGLDFGFLSNAKLL
TTAITRAQSLVAVVGDPVSLCSVGKCRKLWEKFLQLCSEAGSLYGISWSTLRSQLDGVEL
KKTYVLNPLAPEFVPRCIYYSIPPVPMVHTMPPYVNMYSPYNSYIPTYHVRPMLGPQALP
YLPQPGMPSQWSPVHYGASAKTPLVRPAAARLGQPLIASHPLRSAVVTATPPHYMDPHGY
DYQLHNNVMSMYPYQAGSFPHRLPTMRHPAELDPFTCGAFLPPPYQHIRPVPQRVVPPIG
FRGPSFGRAMSLPPPQLGRLTPHSEGEKSYQFLNNVHFPERQLSNPPSVIARPVRSRADT
ESPMSSHSRESSHSSANDSRHSSQSQPQQHSQSHVHPQVEAQKIPLLGPHIQFQSKPQPP
NIHMDQQGPPMQQLRQQTSHHQMIPQPHPHSNGSVPVEDATLPTPDVVRSINELINDHSP
TKTGSLWGSVDVETNNKLDLIQGRCRSPTTETWLGGNSSNSIKTANLNLSHSNPNPWSGT
PTSVGKIVTVQELEASLHMRKYPSGNVSGTGLNKAPGPLPFSPRELEKNVHIRENEEVGG
GFGKGDVPPPPGFSSLNRLVDPLVRLDLSEGEPVGYRTPSLPLYLRRGSRESSSCSPGGT
RNPHQSSVVGGMHSNNHSGSLSSLWNIGREEMNPGASQGELGLQNLSLSLGISPIGALNP
FQNSQDSKTYAGVVRSSLQPSDSEKGEECEYALKDLGDKRLYTSNNHLYQHFQ
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggcagaaaaggaaattcagaaacaagtgaaaacacaggaagttcagccata
cttggcaggcataagtggaagaagaagaggatcccggagatgcagggagtacgtccaaaa
tcgaaaagcccacatggggatgcccatccagaggtggcagatgacatgccagcctcagat
cctgtgtccaagggggaagaactggcagtggcattgaggagtggagtgagaagagagaag
tcctttgagaaggagagatcacctactggacgcctccactgctcctactgcaatgtatat
ttcagtggaaaactggaactccaggcccattgccgtgggcaggaccaccagacgaccatc
atgtctgacgagggtagggactggaagcatcgtcctccaccacgtggcctgggagcagat
gaatatgccctctgctccacctacaaggacacacacaactgcaggctggcagaccagtgt
gtgggggcccacagtgatgcagaactgctggagtggcaggagcggttcgagtaccgctcc
atgaaactggagcgagcaagggagaagcagttacatggggccacgtatgcagaccaactc
ctggagcgcctgtcacaagcccagcaccaggatgccctaatctcagagaagattgatggt
gtccttgtcaacgtgagtatggagcccaacctcagagtttctcagaaaccaagtcagcat
gagtggaccattagcttgcggccaagtactcctctcagggtagtttctcttctccatgat
gcccacaggactcactttgccatttcagaagttacacagattgacaaccaccgtcacatt
cataaatcatatgagccagagaacaaccaggagtggataaaccccgacatggaggctgtg
cttccaccagacacacctgtgcaagagtacaaagtaaccattctcttcaaaacagctata
tatggaacattcagacaggctgtcatttttgacttcggcacagagccagtcctcatgcag
aggttgtgtgtggacgtgatcccagtagaagacctgagtgcaatggaggagacaaagagg
acaatcctgaccaggagtgaaaggtggtgtgaggaaaatgtggatattatccattttgag
ccaaagcctcatgaactgagtgatcacgacaagagcattttagcaatgtttcccccacca
accaatgagaattttgtgttcacacagtcctccatgcagaaggtacccacaaggaacaac
tactgtagtcgcctccatgacctccttcacattgaggagttagcccagtttgacttaatg
gcaaggttcaacatcaagacaaccctgcagattgtaaacacatatatgctcttaccctcc
actgcatccacagccaagtactcaaggcctggtgaactctttgccaagctggaactctca
tcagagatctcggaggactcacaccatggaaggctcgtgttatccaactgtaacaccatc
cttgtttcccctgtcagtgaagagtcagagaccaaggaaactttgaagcaggaatcggca
gcctctgtctcaccaagtgtaggaaagaaagagggcgagagtgaggaaaaagaaatatta
aagcccaagcgaagaatctatgaggttttaattgaagacaagaccaagaaagaaatatac
ctaaggttctcagaggttgctgtctctgagctacaccttgcacatgatgaggaagtcaca
gtagaagtgcaatttcagctgaatcgactgccactctgcgagatgcattctgctctggac
cgtttgccatccttagatatcgttttcccagacatgaccctggagcccaccatcccatgg
agccccataaatgtctctctttgcagacagtggggtgaaggtctggacatgagattaaac
cccaagcagaaggaggctcttgttgccatcacagccccacatggcctcattctgcctcct
attctcataattggtccatatggtacagggaagacctacactttagctcagggtatcaag
cagattctgcagcagcctgacacaagaattctcatctgcacacactctaacagtgctgca
gacctgtacatcaaggattacctgcatccatatgttcaatcaggacatgaggaagcaaag
ccacttcgtatctactaccggaaccgttgggttacaactgtacacaccagtgtgcaagag
tattgcttgattgaaatggatcagggtgtgcgtaaatttgtcatgccaacagaaaaagag
attttagcacaccgtgtgattgtggcaactctcaacacatctagatatcttgcttctctc
aatctggagaaaggtgtgttcacccacatcctcatagatgaggcagcccaagctatggaa
tgcgaagccctcaccccaatggccttagtacggccagacacccgcattgtcttggctggg
gattacatgcagctgagccctgaggtattctcaccattttgtgaagagcgaggtcttggc
atgtccctgctagaacgcttgtatgacctatacccagctgactctccttgtaaaatcatg
ttggtggagaactacaggtctcactcagccattatcaagtacacatctgacctgttttac
gagggacgtctggtagccagcggtaaacagacagcccatccaaaattccatccactgacg
ttcttcacagctagaggagaggatttccaggatcctaattcgactgcgttctacaacaac
tctgaggtctatgaagtttgtgaacaagttggtgagatcatcagccattggccaaagaag
gagtggggtccagtaggtgaaaattccattggtgttgtcactccatatgctgaccaaatg
gtgcgcatcagggctgaactgaggaagcgaaaattgtacaagattaatgtagagagagtc
ctcaatgtacaaggcaagcagtttagggtaattgtactttccactgtgcggacacgccac
acatgcaaaccaggagccgagggcttagactttggcttcctctccaatgcaaaactccta
acgacagccataacaagagcacaaagtctggttgctgttgtaggggatcccgtctcactc
tgttcggtggggaagtgcaggaagctttgggagaagtttctgcagttgtgttctgaggct
gggtctttatatggaatatcctggtcaacacttcgttcacagcttgatggggtagagctc
aagaaaacatatgttctgaaccctctggcaccagagtttgttccccgctgtatatactac
tctatcccacctgtgccaatggtacatactatgcctccatatgtaaacatgtattctcct
tacaactcttacatacccacttaccatgtgcggcccatgctagggcctcaggccctaccc
tatctcccacagcctggcatgccatcccaatggtctcctgtgcactatggtgctagtgca
aagactccattggtgaggccagcagcagctaggctagggcagcctctcattgcatcccat
cctttaagatcagctgttgtcacagcaactcctccccattatatggatccccatgggtat
gactatcagttacacaataatgtgatgtctatgtacccttatcaggcaggatcctttccc
caccgcttgcctaccatgcggcacccagcagagctggacccctttacttgtggggccttc
cttccacctccttaccaacacataagacctgtgccacagcgcgtggtcccaccaattgga
ttccgtggtccttcctttggaagagccatgtcccttccgccaccccagctgggcagactg
accccgcactctgaaggagagaagtcctaccagtttctcaataacgttcacttcccagag
cgacaactgtccaaccctccctctgtcattgccagaccagtacgttcccgagctgacact
gagtcacctatgtcatcacattccagagagagctcacattcaagtgcaaatgatagtcgg
cattcttcacagtcccagccacaacagcattcacagtctcatgttcatcctcaagttgag
gcacaaaagataccattattaggacctcatatacagttccaatctaaaccacagcctcct
aacatccacatggatcaacaaggtcctcctatgcagcaattgagacagcaaaccagccat
catcagatgatccctcagccacatccccattccaatggaagtgtccctgttgaagatgca
actttacctaccccagatgttgtgcgcagcattaatgaacttattaatgaccattcacca
accaagactggaagcctctggggttcggttgatgtggaaactaataacaagttagacctc
atacaaggtagatgtcgttcaccaacaacagaaacctggttaggaggtaatagttccaac
agtatcaaaacagcaaatctgaacttgtctcattctaacccaaatccttggtcaggaacc
cccaccagtgttggaaagattgtgactgttcaggagcttgaggcctccctgcacatgagg
aagtaccccagtggaaacgtatcaggaacaggccttaataaagctccagggccacttccc
ttcagccctagggaacttgagaagaatgttcatattcgagagaatgaggaagtaggaggt
ggatttgggaaaggagatgttccaccacccccaggatttagtagtttgaatcgattggtt
gatcccttagtgcggctggatctcagtgagggggagccagttggctaccgaacccctagt
ttacctttgtacctaagaagagggagtcgtgaatcatcatcctgttctcctggtggcaca
cggaatccccaccagagctcagttgtagggggtatgcacagtaacaatcacagtggctct
ctttcatcactttggaacataggaagggaagagatgaatcctggggcctcccagggtgag
ttaggacttcagaacctttcattatctcttggcatttcacccattggggcacttaatcct
ttccaaaacagccaggacagcaaaacttatgccggagtcgtcaggtcgtctctccagcct
tcggactctgagaaaggtgaggagtgtgagtatgcactcaaagatctgggagataagaga
ctgtacacatcaaataatcatctctatcagcatttccagtaa
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integrated database retrieval system
