Penaeus japonicus (kuruma prawn): 122263996 Help Entry 122263996         CDS       T07703                                  Name (RefSeq) DNA ligase 3-like   KO K10776   DNA ligase 3 [EC:6.5.1.1] Organism pja  Penaeus japonicus (kuruma prawn) Pathway pja03410   Base excision repair Brite KEGG Orthology (KO) [BR:pja00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     122263996  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pja03400]     122263996 Enzymes [BR:pja01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      122263996 DNA repair and recombination proteins [BR:pja03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      122263996 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme BRCT DUF3802 Motif Other DBs NCBI-GeneID:  122263996 NCBI-ProteinID:  XP_042888547 LinkDB All DBs Position Unknown AA seq 1031 aa AA seqDB search MFGSVLKVSRHLAFVLSSTSSAQITRRIPFGSAACHQKLRWKTHTSTFDFVPQASLRVQN HNLKNLNPQLGFNTVSCAKMSSFPFCAEYDKRGQAKCKKCKEKCEKGELRIGKIVANPFS ESGGDMKQWHHVNCIFDTFKRARATTKKIEDPVDDIEGWENLEEEDQKKIRGLIDDLQNE ISNKKATPKKQTPQKKTPAKAGGQQQPGKKAAGTPDKPDAGLSRTPSAIRNDPGMDPTHK DNSFREFRRVCANVAEESSYIGKTNIVATFLKKGTSKDGFQGDLRLWVKLLLPGVIKRVY NLQSKQLIKLFSQLFNANQEEMLEDLEQGDVAETIRTFFEQSTALPPIKKAVLSIQDVDQ FLEELTGMTREEEQSYVLKKIAKKCTGNDLKMVIRLVKGDLRINAGAKHILDAVHNEAYE AFQTTRNIDAVLDQIILSKTTGETLKLKAKVMTPVLPMLAEACKSVEYAFKKCPSGVMYS EIKYDGERVQVHKKDGKFMYYSRSLKPVMPHKVSHFKEYIPKAFPHGKDLILDAEVLMMD TKTGNPLPFGTLGVHKKSEFQDATVCLFIFDCLHYNGEDLMDKPIAERKKILEENMVEIK NHIMFSEMKKIKRKEDLHDMINQVLKQGLEGLVLKDVNSIYEPGKRHWLKVKKDYLNDGA MADTADLVVLGAWYGTGKKGGMMSVFLMGCFDARIKKWCTVTKVHTGHDDAALARLQTQL DMVKISQDADRVPGWLKCTKTMIPDFVSADPKKSPVWEITGAEFTRHQVHTADGISIRFP RVTRERSDKTWEQATDLAYLQELYKKSREYSDLDALTSDRTDDDDDSGKKSGDSGSSTPM KGPSKMKASSPKCDKVSTASPSPDKAKSKEKIQRTLSAFVKVDRAKPESEEEMEHSGVAS GKRRSDDSKQGHPNKKLNKYGTSSHNENESRQPLPSAGLTHPTKNPLPDFFIGVQVGIPD TVDKAEDMKRYIIAYGGDVLPDYQASEATHLVVVNKKDKWPSSWRGQRISPEWIWDSIKL QRLQSSRIYSV NT seq 3096 nt NT seq  +upstreamnt  +downstreamnt atgtttggaagtgtgctcaaagtgtcaaggcatctcgcttttgtactgtctagtacctct tctgcccaaattacaagaagaataccttttggaagtgctgcttgccatcaaaaattaagg tggaagacacacacttctacatttgattttgtgccacaagcatctctaagggtacagaat cataacctcaaaaatctaaaccctcagttaggatttaataccgttagctgtgcaaaaatg tcatcgttcccattctgtgctgagtacgataagagaggacaagccaaatgcaagaaatgc aaagaaaaatgtgaaaaaggtgaactcaggatcggaaaaattgtagcaaatccatttagt gaatcaggcggtgatatgaaacaatggcatcatgtgaactgcatttttgacacgtttaaa cgtgctcgtgccaccaccaagaaaattgaggaccctgtagatgatattgaaggttgggaa aacctggaggaggaagatcaaaagaagattagaggtctgattgatgatctgcagaatgaa atatccaacaagaaagccacaccaaaaaaacagactcctcagaagaaaactcctgctaag gcaggaggtcagcagcagcctggaaagaaagcagctggaacaccagacaaaccggacgca ggattatcaagaacaccttcagcaataaggaacgaccctggtatggaccccacacacaaa gataattcttttagagagtttcgtcgtgtgtgtgctaacgttgccgaggaatcaagttat attggcaagactaatattgtagcaacatttttgaaaaagggaactagcaaagatgggttc caaggtgacctgcgcctctgggttaagctgcttctaccaggagttataaagagagtgtat aacttacagtcaaaacagctcattaaactcttctctcagttatttaatgcaaaccaagag gaaatgttggaagacttagaacaaggtgatgttgcagaaaccattcgcactttctttgag caatctactgctcttcctcctattaagaaggctgtactgtcaatacaagatgtagatcaa tttttggaggagctgacaggaatgacacgagaagaagaacagtcatatgtgcttaaaaag attgccaaaaaatgcactggaaatgatttaaaaatggtgattcgccttgttaagggagat ctacgtattaatgcaggagcaaaacacatcctggatgcggtgcataatgaagcttatgaa gcctttcaaacaacgagaaatatagatgccgtactggaccaaattatcctttccaaaaca actggtgaaactctaaagttgaaagcaaaggtcatgactccagtgctacctatgctggca gaggcatgcaaatctgtggagtatgccttcaaaaagtgcccaagtggtgttatgtattct gaaataaaatatgatggagaaagagtacaagttcataagaaggatggaaaattcatgtat tattctcgttccctgaagccagtgatgccacacaaggtctctcactttaaggaatacatt ccaaaggcatttcctcatggaaaggatcttattcttgatgctgaagttttgatgatggac accaaaacaggcaaccctcttccctttggaactcttggggttcacaaaaaatctgagttt caagatgcaactgtctgtctttttatctttgactgcctacattacaatggagaagattta atggataagccaatagcagaaagaaaaaagattcttgaagaaaatatggttgagataaaa aatcacatcatgttttctgaaatgaagaaaatcaagagaaaggaagacctccatgacatg atcaaccaagtcttgaagcaagggttggaaggcctggtactgaaggatgtgaatagcata tatgagccagggaagaggcactggctaaaagtaaagaaggattatttgaatgatggtgcc atggctgacacagcagatttggttgtcttaggtgcctggtatggaacagggaagaaagga ggaatgatgtcagtcttcttgatgggatgttttgatgcaagaattaagaagtggtgcact gtcacaaaggtccacacaggtcatgatgatgcagcattggcacgattacagacacagtta gacatggttaagatcagccaagatgcagaccgtgtgcctggatggctcaagtgtaccaag accatgatcccagattttgtgtcagctgatcctaagaaatcacctgtctgggaaataact ggtgcagagtttacacgacatcaggttcacactgcagatggcatctccatcagatttcca agagttacaagagaacggagtgacaaaacatgggaacaagctactgacttggcatattta caagaactttataaaaaatccagagaatattcagacttggacgccttgacttctgatcga acagatgatgatgacgatagtgggaaaaaaagtggggactctggatcatctaccccaatg aaaggtccttcaaaaatgaaagcaagtagtcccaaatgtgataaagtatccacagcatca ccaagtcctgacaaggcaaagagtaaagaaaagattcagagaacccttagtgctttcgtc aaggtagacagagcaaagccagaaagtgaagaagagatggagcacagcggagtggcgtca ggaaaaaggcgctcagatgacagcaaacaaggacacccaaataaaaagttgaataagtat ggcacctccagccacaatgaaaacgaaagtcgacaaccgcttccctcggctggcctcacg catcccacaaagaatccacttccagattttttcataggagttcaggtaggaataccagac actgtggataaagcagaagatatgaagagatatatcattgcttacggcggagacgtgttg cctgattaccaagcgagcgaagccacccatctggtggttgtgaataagaaagacaagtgg ccttcgtcgtggcgcggccagcggatttcgcccgaatggatatgggacagcattaagttg cagaggctccagtcttctcgtatatacagcgtctaa

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