Penaeus japonicus (kuruma prawn): 122264006
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Entry
122264006 CDS
T07703
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja04140
Autophagy - animal
pja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122264006
04148 Efferocytosis
122264006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pja04131
]
122264006
Membrane trafficking [BR:
pja04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
122264006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
TPR_Vps41
Beta-prop_RIG_2nd
zf_Tbcl_Rhp7
Motif
Other DBs
NCBI-GeneID:
122264006
NCBI-ProteinID:
XP_042888560
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MHDAYEAIPILEKLPLQIEAVTAYDGNLVVGTRQGHLLMYTVTPGTTRRWDVALLCSNKN
FSRKPIVQVAVVPEHQIIVSLSDNVVSVHDLTVFNLPLLSTLTQTKGATAFDLDIKHHIS
LTGEAVVTVRLVVAVRRKLQLFYWKARQFHQLREDLALPDVPRALTWCMEAIAVAFKHEY
WLVKLTGEQKELFATGRSQEPLIARMEDGGQLALAHDKESIFVDAEGNATCNYTLKWVEQ
PIAMAYDKPYLVAILPKTIEIKTPEPQHTVQSLNLEKPRLLAVAQTAKGKGQVYVASTSH
VWCLHAIPVNQQIPQLLSEKQFALALKLVDVWDEADDAKCQMKKHIQHLQAIHLFCSKNY
QEAMNLFLTLNIELPFVIGMFPDMVPEEYRNRLQYPYPLPTLSGADLEKALQALVHFLLE
IRHQLVGSDNDKGEKSEVLCDNKYPSAATSIKSRHEKLQIIDTTLLKCYLQTNDTLVKSL
LRMRDSRVSVVEGERVLRHAHKYPELVLLLQTRGLHQRALQLMIRHAKRPDSPLYGHHHT
VAYLQHLGPQHIDLIFEYGGWVLKSHPEDGLKIFVGDKSTSGEVDQLPRPKVLNFLKKTE
KSLVIPYLEHVIQEWDDTTPLLHNELIHQYRDIITAPFASSDPANQEEEKERRKRYQEKL
LKFLNESEYYTAATLLVHFPYDSLHEERAVLLGRLGQHHQALSIYTLTLKDTQAALKYCQ
KHYTTSGPGSEVYLLLLKLLVSQSDSRSPGSSPYKVQKSQQTQVEAVLELLQNYLHCIDL
GQALKVLPDSVTIQLLKPFIHASLSHAGTVRRQKQIARGLTQSLKLQTSEELVSCQSLKI
PLSEFTYCAVCRKRFTKHSAFAWYPNGDIVHFSCQNQR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgcttacgaggcaattcctattttggagaagttgccattgcagattgaagct
gttactgcctacgatggaaacctagtagtggggacacgtcagggccacctgcttatgtac
acagtcactcctggcactacacggcgctgggatgtggcactcctttgttccaataagaat
ttttctcggaagcccattgtccaggtggcagtggttccggaacatcaaattattgtgtcc
ctttcagacaatgttgtaagtgtccatgacttgacagtcttcaatctgcctcttctctca
actttaacccaaacaaaaggagccacagcttttgatcttgatattaagcatcacatatcc
ttaacgggtgaagcagttgtaacagttcgtctggtcgtggctgttagacggaaattacag
ttattttactggaaagccagacagtttcaccagttgcgagaagacttggctctgcctgat
gttccacgagcacttacttggtgtatggaagccattgctgtggctttcaagcatgagtat
tggcttgtgaagctgaccggggaacagaaagagttgtttgcaaccgggcggagtcaggag
cccctcattgcacgcatggaagatggagggcagctggctctagcccatgacaaggagagt
atatttgttgatgcagaaggcaacgcaacatgtaattatactctgaaatgggttgaacag
ccaatagctatggcttatgacaagccctatttagtggcaatcttaccaaagacgatagaa
attaaaacaccggaacctcagcacactgtacagtctctgaacctggagaagccgaggtta
cttgcagttgcacagacagccaaaggaaagggtcaggtgtatgtagcatccacgtcacat
gtttggtgtcttcatgcaatacctgttaatcagcagattccacagttgctttcagagaag
cagtttgccctggctttaaaactagttgacgtttgggatgaggctgatgatgccaagtgt
cagatgaagaagcacatccagcatttgcaagccatacatcttttttgcagcaagaattac
caagaggctatgaatctttttctgacgcttaatatagagttgccttttgtcattggtatg
ttccctgacatggtgcccgaagaataccgcaaccggctacagtatccttaccctcttcca
acccttagtggggcagacctcgaaaaagcgcttcaagccctagtgcacttcttgcttgag
atacggcaccagcttgtagggagtgataacgacaagggcgagaagagtgaagttttgtgc
gacaacaagtacccttctgctgcaacaagcattaagtcgaggcatgagaaactccagata
attgacacgacgctcctgaaatgctatttacagactaacgacacccttgtgaaatccctg
ttgcggatgcgagacagtcgggtgagtgtggttgaaggagagcgagttctgcgtcacgca
cacaagtacccagagttagtgttgttgctgcagactagaggccttcatcagcgcgccctc
cagttaatgatccgccatgcaaagagaccagattctccactgtacgggcatcaccatact
gtagcttaccttcaacacttaggtccacaacacattgatctgatattcgagtacggaggc
tgggttctgaaatctcacccggaagacggcctcaagattttcgtaggtgataaatccact
tcaggagaagtcgaccaactgccgagaccaaaggtgctaaatttcctcaagaagacggaa
aagtctctcgtcattccttacctggaacatgtgatacaagaatgggacgacacaacgcct
ctattacacaacgagttgatacaccagtatagggacatcattactgctccctttgcatca
agtgacccagctaatcaagaggaggaaaaggaaagaagaaaaagatatcaggagaaacta
cttaagttccttaatgaatctgagtactacacagcagcgactctccttgtgcattttcct
tatgacagtctgcatgaagagcgggcagtcctactgggtcgtctaggacaacaccaccag
gctctgtctatctacactctaacgcttaaggacactcaggcagccctcaaatactgtcag
aaacattacacaacatctgggcctggaagtgaggtgtatctgctacttctaaagctgtta
gtaagtcagtcagattccaggagcccagggagctctccatacaaagtccaaaagtcacaa
cagactcaggtggaagctgtgctagagcttctgcagaactaccttcactgcattgatcta
ggacaggctttaaaagtactccctgattcagtcacaattcagctgttaaaaccattcatt
cacgcatctctaagtcatgctgggacagtacgcagacaaaaacagatagcacgtggactc
actcagtcactgaaactccagacgagtgaagagcttgtatcttgccagagtctgaagatt
cccctctcagagtttacatattgtgccgtatgcagaaagaggtttacaaaacacagtgct
tttgcttggtaccccaatggagatatcgtacatttctcgtgccaaaaccagcggtag
DBGET
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