Penaeus japonicus (kuruma prawn): 122264156
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Entry
122264156 CDS
T07703
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122264156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122264156
03041 Spliceosome [BR:
pja03041
]
122264156
03036 Chromosome and associated proteins [BR:
pja03036
]
122264156
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122264156
Spliceosome [BR:
pja03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
122264156
Complex B
122264156
Complex C
U2 SnRNP specific factors
122264156
Chromosome and associated proteins [BR:
pja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
122264156
TFTC complex
122264156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
122264156
NCBI-ProteinID:
XP_042888830
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRASGITHAVHGNFSGTRTQELVVSRGRSLELLRPDPNTGKVHTILTTDIFG
VIRSLMAFRLTGGNKDYVVVGSDSGRITILEYSQAKNQFERIHMETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAVEKQKLVYILNRDAAARLTISSPLEAHKSNTLVYHMVGVDVGFENP
LFACLEIDYEEADTDPTGEAVHRTQQTLTFYELDLGLNHVVRKYHEPLEEHANFLISVPG
GNDGPSGVLVCSENYLTYKNLGDQPDIRCPIPRRRNDLDDPERGMIFICAATHKTRSMFF
FLAQTEQGDIFKITLETDEDVVTEIKLKYFDTVPPATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFYAPRQLQNLVLVDELDSLSPIMACQIADLANEDT
PQLYTVCGRGPRSSLRVLRHGLEVSEMAVSELPGNPTAVWTVRKRTEDLYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLACSQLGDDALVQIYPDGIRHIRADRRVNEWKAPG
KKTIVRCAVNQRQVVIALTGGEIVYFEMDPTGQLNEYTERKEMKSDVICMGLGRVPAGEQ
RSRFLAVGLSDNTVRIISLDPNDCLTVRGMQALPALPESLSIIEMGGQEGSESESRTLGA
LYLNIGLQNGVLLRTVLDSVTGDMSDTRTRYLGSRPVKLFRIIMQGSEAVLAMSSRSWLS
YYYQNRFHLTPLSYESLEYAAGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSHPLE
YTPRKFVIHQESGHLVVIETDHNAYTEDTKRQRKHQMAEELKEAAGEEEAEVAERMAEAL
LSEDLPDAVFGAPKAGPGMWASLIRIIEPIQGNTLYTMRLDQNEAAFSIALVKFANQSDM
DQQFLLVGTVKDYQLSPRQVDCGYIYTYRVVGDCTSLELVHRTEVEDIPTALCSYNGRVL
VGVGRLLRIYDLGKKKLLRKCENKHVPNLIVDIKARGQRVFVSDVQESLFVLRYKRHENQ
LIIFVDDTNQRWVTTSCLLDYDTAAVADKFGNIAVIRLGGDTNDDVDEDPTGNKALWDRG
LLNGASQKTEVIANFHVGETVNTLEKATLIPGGSESLVYTTLSGTVGVLVPFTSREDHEL
FQNLEMHMRSEHPPLCGRDHLSFRSYFFPVKNVIDGDLCEQFNMVDSGKQRSISEDLDKT
PNELSKRLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacttgactctacaacgtgcctcaggcatcacccatgctgtgcatggg
aacttttctgggacacgaacacaagaactagtggtgtccagaggacgatcattggaactt
ctgagaccagatccaaatactggaaaggttcacactattttgacaaccgacatatttggc
gttattcgctcattaatggcattcaggttgactggtggaaataaagattatgttgtggtt
ggatctgactcaggtagaatcaccattctggaatacagtcaagcaaaaaatcaatttgag
cgcattcacatggagacatttggcaaaagtggttgcagacggattgtacctggccagtac
cttgccattgatccaaagggcagggcagtcatgattggtgctgttgaaaagcagaagttg
gtatatattctcaaccgtgatgcagcagcgagactgacaatctcctctccactggaagca
cacaaaagtaacactcttgtataccacatggtaggagtggacgttggttttgaaaatcca
ctctttgcctgtctggagattgattatgaggaagcagacacagaccccacaggagaggct
gtacacaggactcagcaaactctaacattttatgaactagatttgggactcaaccatgtg
gtcaggaaataccatgagcctctcgaagaacatgcaaacttcctcatatcagtaccaggt
ggtaatgatggaccttctggtgtcttagtttgttctgaaaactatttaacctacaagaat
ttaggagaccaacctgatattagatgtcccattcccaggagaagaaatgatcttgatgat
ccggaacgaggaatgatcttcatttgtgcagccactcacaagacaaggtctatgttcttc
ttcctagctcagacagagcagggagacatcttcaagattactttagaaacagatgaagat
gttgtgacagaaatcaagttgaagtattttgacacagtaccaccagcaacagcaatgtgt
gttctcaagactgggtttctctttgtggcctcagaatttggaaatcactacctgtaccag
attgctcatttgggtgatgatgatgatgaaccagaatttagctcagctatgccacttgaa
gaaggagatactttcttctatgcaccaaggcagttgcaaaaccttgtgcttgttgatgaa
cttgactcactttctcccattatggcttgtcaaattgctgatttagcaaatgaagataca
ccacagctgtatactgtgtgtggcaggggcccaaggtcatctcttcgtgtacttcgtcat
ggtctagaagtgagtgagatggctgtgtcagaattgcccggtaaccccacagctgtatgg
acagtcaggaagcgaactgaagatctttatgattcgtacatcattgtatctttcgtaaat
gccacgcttgtgctgagcattggagagactgtagaggaagtgacggattctggtttcctt
ggtacgactcctacattggcttgttcccagcttggagatgatgcacttgtacagatctat
ccagatggtattcgccacatcagagcagatcgtcgcgtgaatgaatggaaggcaccagga
aagaaaactattgtgcgatgtgctgtcaaccagagacaagtagtaattgctctcactggg
ggagaaattgtctattttgaaatggatccaacaggccaattgaatgaatacactgagagg
aaggaaatgaagagcgatgtcatctgcatgggccttggacgtgtacctgccggggagcag
cgttccaggttcttagctgtgggactctccgacaatactgtcaggatcatatccttggat
cccaatgattgcctaacagtacgaggcatgcaggctttaccggctttaccagaatctctc
agtatcattgagatgggtggtcaggaagggtcagagagcgaatctcggacattaggtgca
ctctacctgaacattggtttacagaatggtgtattgttacgaactgtattagattcagtg
actggtgacatgtctgatacacggacaagatatctgggttccagacctgtcaagcttttc
aggattattatgcaaggaagtgaagctgttcttgctatgtcatctcgttcatggttgtcc
tactattatcagaatagattccatttgaccccactctcatatgaaagtctggagtatgct
gcagggttctcctcagagcagtgtcctgagggtattgtagctatttccactaacactctt
cgcattttggctctggaaaagctgggagctgtttttaatcaggtatcccatccactcgag
tacactcctcgcaagtttgtcatccaccaagagagtggtcatttggtggttattgaaact
gatcataatgcttacacagaggatacaaaaagacaacgaaagcatcagatggcagaggaa
ttgaaagaagcagctggagaggaagaagcagaagtggctgaacgcatggcagaagcactc
ctttctgaggatttaccagatgcagtatttggtgcaccaaaagctggaccagggatgtgg
gcatctctcattcgcattatagaacctattcaaggaaacaccctatatacaatgagattg
gatcaaaatgaagcagctttcagtattgctctagttaaatttgcaaatcagagcgatatg
gatcagcagttcctcttggtcggaacagtgaaggactaccagttaagcccccgacaagtt
gactgtggatatatctacacttacagagttgttggtgactgcaccagtctagagctagtt
catcgtacagaagttgaagacattccgacagctttatgctcatacaatggcagagtttta
gtaggggttggaaggctacttagaatatatgacttggggaaaaagaaactactaaggaaa
tgtgaaaataagcatgttccaaatctgattgtggatatcaaagcacggggacagcgagtc
tttgttagtgatgttcaagaaagcttgtttgtgctaaggtataaaagacatgaaaatcag
ctcatcatatttgtggatgatacaaaccagcgatgggtgaccacatcttgcctccttgat
tatgatacagcagctgtagcagacaagtttggcaacattgcagtgatccggttgggtgga
gataccaatgatgacgttgatgaagatcccacaggaaacaaggccctttgggaccgtggt
ctactgaatggtgcatcacaaaagacagaagttattgccaacttccatgttggagagact
gtaaatacacttgagaaagccactttgatccctggaggcagtgagtctctagtatatact
acgttgagtggcactgttggagttttggtaccatttacgtcaagagaagaccatgagctt
ttccaaaaccttgagatgcacatgaggtcagaacatcctccgctgtgtggacgagaccat
ctttctttcaggtcatactttttccctgtgaagaatgtcattgatggagacttgtgtgag
cagttcaacatggtagattcaggcaaacagcgcagtatttctgaagacttggataaaact
ccaaatgaactttcaaagagattagaagacattagaactcgctatgccttctaa
DBGET
integrated database retrieval system
