Penaeus japonicus (kuruma prawn): 122264278
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Entry
122264278 CDS
T07703
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122264278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122264278
03012 Translation factors [BR:
pja03012
]
122264278
Enzymes [BR:
pja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122264278
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122264278
Translation factors [BR:
pja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122264278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_22
ATPase
AAA_14
AAA_19
AAA_16
AAA_23
ABC_tran
NACHT
PhoH
NB-ARC
TsaE
Motif
Other DBs
NCBI-GeneID:
122264278
NCBI-ProteinID:
XP_042889031
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MDASQVRNVGRVLDSLDERNYSGRGMKKPEPRGGASCRPEADDDLGDEWDKRISSIVKKE
FDDDDNTDVPGSSSGDADSFSNPDAWIQDNTQKREEQEKRPRSDAFAQRVNNMQESDFKQ
AYMANVHGNQLRDAGGLSAVKGNRMGLARNEAVDERLYEDMMQQQNCPKYQKMLQVRKNL
PSYKMRDEIVDTVRDNQVVVISGETGCGKTTQVAQFLLEDAIADGQGSTCRIVCTQPRRI
SAISVAQRVADERGENLGKSVGYQIRLEATQPRSEGSILFCTTGIVLQWLQSDPLLNKVS
HLVLDEIHERDMLSDFVIAIAKDLIKVRPDLKVILMSATLNAELFSEYFGGCPMLHIPGF
TYPVKEFYLEDVVEMTRFKFEDERELPIWVRKSNKNKENDFEGMIAPYIRNLERSGKYSC
HTLDELYKTTSEKLNLDLVLELLRHISRQEPGAVLVFLPGWADISKLHTLIQGDRSFSRS
NHLVIPLHSLMPSVNQREVFNRPPPGIRKIVLATNIAETSITIDDIVYVINAGRIKMKNY
DKEANLVTLLPEWVTLANARQRRGRAGRVQEGVCYHLYTRAREKTLDDYPLPEIQRTRLE
EIILHVKILRLGSVKPFLSKLMMPPDPNVVEKSLEMLQAINALDDSENLTPLGFHLARLP
VDPLTGRMLIMAAIFSCVGPILTIASALSFKDPFTVPLGKERVVDEIKKKMSRGTKSDHL
MIVNVYDGWEDAWRHREARDYCWDNFLSNAVLEQLRNMRRQFMGLLYEHKFVNSKDPQTA
EANRNSENIALVRAIITSGLYPNVARVLPQRGRPNPHKPRSIRTQYERRVALHPKSVNEK
EKEYESPWLMYREKIKSSKVYIHDSSMVPNYPLLFFGQKLNYVGGVINVDDFVRVRCSQH
VAHLVQSLRTQLDQLLEYKISHPGVTRWDKSSKEGALLHTIVDLISSENICSSQDGNDYY
DDGDDY
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagtcaagtgcgaaatgttggacgagtgcttgactctctggatgaaagaaat
tactctggcagaggtatgaagaagccagagccaaggggtggtgcaagttgccgacctgaa
gcagatgacgaccttggtgatgagtgggacaaacgcatatcatccattgtgaaaaaggaa
tttgatgatgatgacaacacagatgttcctggtagcagttcaggagatgcagattctttc
tcaaatccagatgcttggattcaagacaacacacagaaacgtgaagaacaggagaagagg
ccgcgcagtgatgcttttgcacagagggtcaataacatgcaggagtcggacttcaagcag
gcttacatggccaatgttcatgggaatcagttgcgtgatgcaggtggtttgtcagccgta
aaaggaaatcggatgggccttgccaggaatgaggcagtggatgagaggctctatgaagat
atgatgcagcaacagaattgcccaaaatatcagaaaatgttgcaagttcgtaagaatctc
ccatcgtataagatgcgggacgagattgtagatacagtgcgagataatcaagttgtagtt
ataagtggagaaactggttgtggtaaaactacacaggttgctcagtttctgttggaagat
gcaattgctgatggacaaggatccacttgcagaattgtttgcacccaaccaaggcgtata
tctgcaatatctgttgcccagagggttgcagatgaacgtggagaaaatttaggcaagagt
gtgggataccagataaggcttgaagccactcaaccccggtctgaaggctccatcctattt
tgcaccactggtattgtactgcaatggctgcagagtgatccccttctcaataaggtgtct
cacctggttcttgatgaaattcacgaaagagacatgttgtcagacttcgttattgcaatt
gcaaaggacctaattaaagtaagacctgatctgaaggtaattttaatgagtgcaacgctg
aatgccgaacttttttccgaatattttggtggctgtcccatgctgcatattcctggtttt
acatatccggtaaaggagttttatcttgaagatgttgttgaaatgacaagattcaagttt
gaagatgaaagagaattacctatatgggtaagaaaaagcaataagaataaggagaacgac
ttcgaaggcatgattgcaccatacataagaaatttggaaaggagcggtaagtactcctgc
cacaccctcgatgaactgtacaagacaacaagtgaaaaactaaatctggacctggtgctt
gagttgctgcgtcacatcagccgccaagagcctggagctgtactggtgttcttgccaggt
tgggcagatatttcaaagttgcacacgctcatacaaggggacagaagtttttctaggagt
aatcatttggtgatcccccttcactctctcatgccttctgtcaaccaacgggaagtgttc
aatagaccacctccaggtatacggaagattgttttagctactaatatagcagaaactagt
ataaccatagatgatattgtatatgtgataaatgctggacgtatcaagatgaagaattat
gataaagaagctaacctggtgacactgttgcctgaatgggtcacacttgctaatgccagg
caaagacgaggcagagccggtcgtgtacaggagggtgtatgttaccacctctatacaaga
gccagagagaagactttggatgactaccctctgccagaaatccagcgcacacgcctggag
gaaatcattctgcacgtgaagatccttcgcttggggtctgtcaaacccttcttgtccaag
cttatgatgcctccagatccaaacgtagttgaaaaatctttggagatgcttcaagccatt
aatgccctggatgacagtgagaacttaactccattaggtttccacttggcgcgtttgcct
gtagatcctttgacaggccgtatgctaatcatggcagcgatattctcctgtgttggcccc
atattgaccattgcctcagcactgtcatttaaagatcctttcacagttcctctgggaaaa
gaacgtgtcgtagatgagattaaaaagaaaatgagtcgaggcactaaaagcgatcacttg
atgatagttaatgtctacgatggatgggaagacgcatggcgccatagggaagcaagagac
tattgctgggataatttcctatccaatgctgtactagaacagctgaggaacatgaggcga
caatttatgggtcttctttatgagcacaagtttgtcaattcaaaggatccacaaacagcg
gaagctaatcggaactctgagaacattgcccttgttcgtgcaatcatcacgagtggcctg
tatccaaatgttgcgcgagttttgccacagagagggcgccccaacccacataaaccccgt
agcatccgcacgcagtatgagcgcagagtagcactacaccccaagtcggtgaatgagaag
gaaaaggaatacgaatctccttggctcatgtatcgagaaaagatcaagtcttccaaggtc
tacatacatgacagttcaatggttcccaactacccattactattctttggccaaaagttg
aactatgttggtggtgttataaatgttgatgactttgtgagagttcgctgctcacaacat
gttgcacatttagtacagagcttaagaactcagttggatcaacttctagaatacaagatt
agccaccctggtgtcactcgatgggataaatcaagcaaagaaggggcgcttttgcacacc
atcgtggatctcatttccagcgagaacatttgctcctcgcaggacggcaatgattactat
gatgatggggatgattactga
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