Penaeus japonicus (kuruma prawn): 122264672
Help
Entry
122264672 CDS
T07703
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pja03400
]
122264672
DNA repair and recombination proteins [BR:
pja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122264672
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HATPase_c
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122264672
NCBI-ProteinID:
XP_042889646
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MALCALPANTIRLIKSTQVITTPVSIVKELVENAIDAEASTVSIKLENYGFVKLEVRDNG
KGINEEDIKVVAKPHFTSKISSFADLSSLTSYGFRGEALSSLCAVADVTITTKTKESSMG
HIYTFTHQGDVATKKPAATPKGTSIMVSNLFKNVPVRRQYYNNSKRRKDELKKVEDLVLS
LCIAAPEVHFTLVHEKNTMVQKNPAKGIQHALINVFPTVYKKFKSESKEIEGGKLEVYLP
DRSFCTDQSTSRSCADRLFVIVNRRPVTHKSIEKMVKAHFSQASEGCHGRYPMGIISLDL
SPDDIDVNLEPNKNKVLLKNEEIALESLKEILENIYGPLEMTKKSSHKKNGSESVTADTD
ITCTLACVTQKQESNSNCREELEVLDEFLAESLKEEEEHVKGGDRCRLEERLAKDYCIYS
DKENDNIFENCDLTPSVVGDRISKPLQVKDSQKTADKPINRDEQYPHTPLRDKVLSLSKA
YDESRLETVGRSYLTSTQDSKSNVLSDRRLSSLSLSTIHSEGGTPKKDHVADVDLSSIGP
SESTFSTSSDTPSIKDSHAEGRKGASSEEFDDCMDFAPVKDQDRHTQVSLRKDPSSQLHT
TVMGDDGIPVFQIQPIEVNDVSEECSSELIQPLQNADKDNISDKEVQSDRAKSLESAGTS
NTEVQEKQTSLTTEREKNSLAGSWSRGHVALGNNIQTVQIVTPKVQEDCAQKSPHTSNAL
KRLQPPTSPGKQLSPLPSKKMKHESLSPTSYEYVQGKSVKRPASAFILYSRDIRREVLRE
NPGKDFAFIAKTMADKWKVADAETKEYYKGLSSEESRRYQEEIRKIRESRSLNNSIFEKS
NISRATLDKFMAPLTPVATKKEGKRSQREPEKKCPRSIKTKHIDIDLGKIRDQLKKKSSQ
ASLPGPFELIGLLPNSGGWLCLEGGSITALNTSRLQEAVLSRTLLNTFSLNPRELKDSIP
FNASTIGTREWTALTKMSMNLEEDRNFYVVNDRRLMANGFKVVIYPASNSSVLSHGEIVG
MADCIGFYGLNDLKEILSVVTSNPTASLGRSRPLKLQHWLKGETVRMIRSGPNVTNREDV
QEKLKDWQKMQGLEGESICPSKWIKQNCLHNKLILTPVYSLDDIPSTPSQN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtgtgccttaccagcaaacaccattcgtctcattaagagtacgcaggtcatc
actacgccagtctcaatagtcaaggagcttgttgaaaatgctatcgatgccgaggcgtca
acagtatctattaaattggagaactacggatttgtgaagctagaggtgcgtgataatgga
aaaggcattaatgaagaggatatcaaggtcgtagccaagccccatttcacatcaaagata
tcatcctttgcagatctatcttccttgacctcgtatggattcagaggcgaggctttgtcc
tcactatgtgccgttgctgatgttactatcaccaccaaaaccaaggagagttcaatgggt
cacatatacacattcacacatcaaggtgatgtagccaccaagaagccagctgctactccc
aaaggtacatctattatggttagcaatctcttcaagaatgttccagtacgaagacaatac
tataataactcaaagaggcgaaaggatgaactaaagaaggtggaggacctggtactgtct
ctttgtattgctgctccagaagtccattttacattagttcatgaaaaaaatactatggta
cagaagaacccagctaaaggcattcaacatgctcttataaatgtgtttcccacagtgtat
aagaagtttaaatcagagtcaaaggaaattgaaggtggaaagttagaggtttatctgcct
gaccgtagcttctgcacagatcagagtaccagtagatcctgtgctgaccgtctctttgtg
atagtcaaccgacgtccagttactcataaatcgattgaaaagatggtgaaagcacacttc
agccaggcttcagagggatgccatggtcgctacccaatgggcatcatatccctggatctt
tcacctgatgacattgatgttaacttagagccaaacaagaataaagtgctgttgaaaaat
gaggaaattgcacttgaatctttgaaagaaatactagaaaatatatatggtccactggag
atgacaaagaagtccagtcacaagaaaaatggttcagaatctgtcactgcagacacagac
atcacttgcaccctagcatgtgttacacaaaagcaagaatcaaacagtaattgcagagaa
gaattggaagtcttagatgagtttttggccgagtctttaaaagaggaagaagagcatgta
aagggtggagatagatgcagattagaggaaaggttggcgaaagactactgcatctatagt
gataaagagaatgataacatttttgaaaattgcgaccttactccatcagttgttggtgac
agaatttcaaagccattgcaggtcaaagatagccaaaaaacagcagataaaccaattaat
agagatgaacagtatcctcatactccactcagagataaagttttaagcttgtctaaagct
tatgatgaaagcaggttagagacagttggcagatcttacttgacaagtactcaagactct
aaatcaaatgtattatcagacagacggctctcatcactctcactaagtacaatccatagt
gaaggcggcacaccgaaaaaagatcatgttgctgatgtagatttaagctccataggccct
tctgaaagtacattttccaccagttcagacacaccatctataaaggattcccacgctgaa
ggaaggaaaggagcaagcagtgaagagtttgatgattgtatggattttgctccagttaaa
gatcaagacaggcatacacaggtatctctcaggaaagacccctcaagtcagttacacaca
actgttatgggtgatgatggcataccagtttttcagatacagccaattgaagtaaatgat
gtttctgaagaatgctcaagtgagctgatacaacctttgcaaaacgctgataaagataat
atttccgataaagaagttcagagtgatcgtgcaaagagtttggaaagtgctggtacttcg
aacacagaagtccaagaaaagcagacatccttaactactgagagggagaaaaatagcctt
gcaggcagttggagcaggggtcatgttgctctgggaaataacattcagacagttcagatt
gtgactcccaaagtccaggaagactgtgctcagaagtcccctcacacctcaaatgcactc
aagcgcctccagccaccaacatctcctgggaagcagctgtcaccattacctagtaagaaa
atgaagcacgaatcgttaagtccaaccagctatgagtacgtgcagggcaagtccgtgaag
agacccgccagtgcgtttatcctttattcgagagatatcagaagagaagtgttacgtgaa
aatcctgggaaagattttgccttcattgccaagacaatggcagacaagtggaaagtagct
gatgctgagaccaaggaatactacaagggactctctagtgaagaaagcagaaggtatcaa
gaagagataagaaagatccgtgagagtcgtagcctgaataattcgatatttgaaaaatca
aacataagtcgagccactttagataagttcatggcaccactaacaccagtcgcaaccaaa
aaagagggcaagcgaagccaaagagagccggagaagaagtgccctcggagtatcaaaacc
aaacacatagacattgacttgggaaagattagggaccagctgaagaagaaatccagtcaa
gcaagtctcccaggtccattcgaactcattggactcttgccaaattccggagggtggctg
tgtctagaaggagggtccatcactgccctcaacaccagtaggcttcaggaggctgtgctt
tctcggactctcctcaacaccttcagcctcaatccaagggaactgaaggactccatacct
tttaatgcaagtaccattggaacacgagagtggactgcactaacaaaaatgtcaatgaac
ttagaggaagaccggaatttttatgtggtaaatgacagacggttgatggcgaatggcttt
aaagtagttatttatcctgcaagcaatagcagtgttctgtctcatggagaaatcgttggg
atggcagactgcattggattctacggattaaatgatttaaaagaaatcttatcagtcgtg
acttctaatcccactgcaagccttggaagatcaagaccacttaagctacaacactggtta
aagggagagacagtaagaatgatcaggtctggacccaacgtaacgaatcgcgaagatgtg
caggaaaaattaaaagactggcaaaagatgcaaggtttagaaggggagtcaatatgtcct
tcaaagtggatcaaacagaattgtttacataacaaactcattctgacgccagtatattcg
ttggatgatattccatcaactccttcacagaattaa
DBGET
integrated database retrieval system