Penaeus japonicus (kuruma prawn): 122265740
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Entry
122265740 CDS
T07703
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122265740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122265740
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122265740
mRNA degradation factors
5'-3' decay
Decapping complex
122265740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_CDC20-Fz
EIF3I
NET2A_C
DUF16
BORCS6
Motif
Other DBs
NCBI-GeneID:
122265740
NCBI-ProteinID:
XP_042891088
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MEGTGYKDGTAILQALLKTSQQGQTITFPGNEERFSSAMFSSEVKVEVGPTDHTSGSSSI
TTRNITNYPWDHQYLSGSLVALHCSGEYLAYAIKAPQKSSGMVRIINRKSGDRGLVKNIR
GMVRDLAFAHLNQRVILAFTDHYGTLYVCEVSASSTEGTLNTDLLLEVNSTSDEASDNHR
IIWCPYIPDEQGGEDDIDDPAYLLVLTHGNRAEIWNINIVLHEYGKGQIMRDRILTGYQL
MEQHSAPITDAAFSPDGTALATAARDGYVKFFQVYMADEKKSPRCLHQWNPHDGKPLSAL
FFLDNHKNPTPEVQFWKYAVTGACNNSELRVWSCESWQCHQTLRFVPTPSLGPLKFKAAM
DPSANFLLLSDINRRVMYVIVVCQDCNANSGGSVGNSGGIAGSGNCIGVKNGGGSGGSAR
LVSVSELPVQYPALSLAVTDAAWKPYKRWKHDHAHDHAHNIHDDGDDDGDGVDVVEGVVM
RFVIINTKSLQEAILRFQPAIPLSASKATTSLDLSASQDSIVVRDGLTDLSMSLSTTVSE
VEGGVSGDGGGTEGQPPPPPPPDALTSPQSSSLTSQHPALHTPPATQPPMNLLTPDSFSS
PRKPEDMEHPDENSEDSSLSSKVTPISSKYDVPYNADFENAALSLLLRCGSGTLMPGSEG
EGANNLNILGSVVSGSSKSPPATSLPPPPSGTPPPLDFQNDEEAPLATSEVSVTAAASRG
GASATSSPSLEVQQILHSQNGKSSDYAEDEDEEDIRAADEVEMPDDDDDEDEDEEEDEPE
ALRQSHSHPKPPPLPEPQTVPQPPSSLAQPTPTSIAPPHSSMPQASSLPQPPSSMSHTSL
PQPPPPASQPSSSMPQIPPVSIPQPPPSMPHPPQTVPKLPLKSPHLPETSPTLTHAHDTQ
KSMASAQPVDVFASVKTLPAQITCAQLEAEIKGGAISPEATESSSQQNSHQSQRNRNHVA
LVRATNRSVPDMRSSSSLEQTQLNGPVTPGVSAAEISELRSLVRSISLSREQSNEVLSQT
LALANKLDKAIQQVNQLAKQVEEVRAAQSQVQMDLPHVVAASLRPVVEATLRSEMRNSVV
PGVVKTMDPLRSHLSQEVHNLMKTSENQVIDAVTKVIHSRSFLDNLGGTVGAVVGPSVQN
SCREAYNKLLLPGLNALTQQVFSQVNESFSRGTKEYLHNVESEMQSGRTAMQESLGKASQ
SLNTACSSLTTQTKNLQENVTKLGSQQNIITESLAERIRSLVREEVTRALQDHQAAVDAR
SRAHTPAPAPHPHNPKLAQQQVQNLISSGQFNTAFKQALSASDLSLVVFVCERVNPQQVF
NITPCPLSQDVLLSLVNQLSHDLSTFTDLKIKYLEEAVMNLDASHPVTREHMRPVLQGFQ
RNLHTHLAANPNHKKVKMLLMAVNHLVAL
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggagggcacaggatacaaggatgggaccgctatattgcaagcgcttctgaagacaagt
caacaaggacagaccataacttttcctggtaatgaagagcggttcagtagcgcaatgttt
agctcagaggtcaaggtggaggtgggaccaacagaccacacatcaggatcttcgtcaatc
acgacgcgcaacatcaccaactacccttgggatcaccagtatctctcaggaagcctcgtg
gccctgcactgttcgggggagtacctggcttatgctatcaaggccccacagaagtccagt
ggaatggtgagaattatcaaccgaaagtctggggaccgaggcctggtgaaaaacatccgt
ggaatggtgcgagaccttgcctttgcacacctcaaccagagagttatattggccttcaca
gatcattatggtactctgtatgtgtgtgaagtgtctgcatccagtacagaaggaacactc
aacacggatctcttgctggaagttaacagcacatcagatgaagccagcgacaaccaccgc
atcatctggtgtccatacattcctgatgagcaaggtggtgaggatgacatagatgaccct
gcctacttgctagttcttacacatggcaacagagcggagatatggaacattaatattgtc
ctgcatgaatatggaaaaggacagatcatgcgcgacagaatattaactggttaccaactc
atggagcaacactcagcacccatcacagatgctgcatttagccctgatggtacagctcta
gcaacagctgcccgtgatggctatgttaagttcttccaggtgtacatggcagatgaaaag
aaatcgccaagatgccttcaccagtggaatccccacgatgggaagccactctctgcgctc
ttcttccttgataatcacaaaaatccaaccccagaggttcagttctggaagtatgccgtc
acaggtgcctgcaacaattctgagttgcgcgtttggtcatgcgagtcatggcagtgtcac
caaacgctgcgcttcgtccccacgccgtccctgggccccctcaagttcaaggctgccatg
gacccttcggctaattttctcctcttgtcagacattaaccgacgcgtcatgtatgtgatt
gtggtgtgccaagattgtaatgccaacagtggtgggagtgtaggcaacagtggagggata
gctggtagtggaaactgcattggtgtcaaaaatggtggtggaagtggtggcagcgcccga
ctggtgtcggtgtcagaactccctgtgcagtaccctgcactctccttggcagtgactgat
gcagcatggaagccttacaagaggtggaaacatgatcatgctcatgatcatgcacacaac
attcatgatgatggtgatgatgacggagatggtgttgatgtagttgagggtgttgtgatg
cgttttgtaatcatcaacaccaagtcactacaggaagcaatattgagattccagccagcc
attcctttgtctgcatccaaagctacaacttcattagacttgagtgcctcacaggattct
attgtggtgcgtgatggactgacagacctcagcatgagcctcagcaccacagtgtcagag
gtggaaggaggggtaagtggagacggtggagggacagaaggccaacctccacctcctcca
cctcctgatgccctcacctccccccagagcagtagcctgacttcacaacaccctgcgctc
cacacccctcctgctacacagcctccaatgaacctgctcaccccagactccttcagttcc
cctcgcaagccagaggacatggaacatcctgatgagaatagtgaggacagctctctctct
agcaaggtgacacccatatccagcaagtatgacgtgccctacaacgctgacttcgagaat
gctgcactctccctactgttgcggtgtggttctggtaccctaatgcctggcagtgaggga
gaaggggcaaacaacctcaatatcttaggatcagttgtctcaggatcgtcgaagtctccc
ccagccacatcgctacccccccctccctctgggactcctcccccccttgatttccagaat
gacgaagaagcaccactagccacatcagaagtgtctgtgactgcagctgcgagccgtggg
ggggccagtgctacgtcctcaccttccttggaggtccagcaaatccttcactcgcaaaac
ggtaagagttcagactatgcagaggacgaggatgaggaagacatcagagcagcagatgag
gttgaaatgccagatgatgatgatgatgaagatgaggatgaggaggaggacgagccagag
gccctgaggcagtcccattcccaccccaaacccccacctcttcctgaaccccagactgtg
cctcagcccccttcttcgctggctcagccaacacccacttccatagcacccccacactcc
tcaatgccccaagcttcatccctgcctcagcccccttcgtccatgtcgcacacctcattg
ccgcagcctccccctcctgccagccaacccagttcctccatgccccagatacctcctgtg
tccataccccagcctcctccatccatgccacacccaccacagactgtgccaaagttgccg
ctgaaatcaccgcacttaccagagacgtcgccaacgctgacacatgcacatgacacgcag
aaatctatggcctcagcacaacctgttgatgtgtttgcctctgtaaagacgctcccagct
cagatcacatgcgctcagcttgaggcggagatcaaaggaggagccatcagcccagaagcc
acagagagcagcagccaacagaacagtcatcagagccaaagaaacagaaaccatgtggcc
cttgtgcgagctacaaacagaagtgtgcctgatatgagaagttcttcaagtctagagcaa
acacagctcaatggaccagtaacccccggggtaagcgctgctgaaatatctgaactacgt
agtctcgtgcgtagcataagcctcagcagagagcagagcaatgaagtgctctctcagacc
ctagcacttgcaaacaaactcgataaggcaatccagcaggttaatcaactagcgaagcag
gtggaagaggtgagagcagcgcagtcacaagtccagatggaccttccccatgttgttgct
gcctctctgcggccagttgtggaggccacactcaggagtgagatgcgcaatagtgttgta
ccaggagtagttaagaccatggatcccctgagatcgcatttatcgcaggaggtccacaat
ctcatgaaaacttcggagaaccaggtcattgatgccgtcacgaaagttatccactctagg
tcattcctagataacttagggggaactgttggggctgtcgttggcccatcagtccagaat
tcatgccgtgaagcctacaataagttgctcttgccgggacttaacgcactgacgcagcag
gtattctctcaagtcaatgaaagcttcagccgcggcaccaaagagtaccttcataatgtg
gagagcgagatgcagagcggtcgcacagccatgcaggagagtcttggcaaagcgtctcag
tctctcaacacagcctgctcatccctcaccacacagacaaagaacttgcaggaaaatgtc
accaagcttgggtcgcagcagaacatcatcactgaatctctggcagagcggattcgttcc
ctggtccgggaagaagtgacacgggctctccaagatcaccaggctgctgttgatgcccgg
agccgtgcccacacgcctgcacccgctccccacccccacaaccccaagttagcccagcag
caggtccagaacctcatttcctcgggccagttcaataccgccttcaagcaggctctctct
gcatcagaccttagcctcgtggtgtttgtgtgtgagcgtgtcaacccccagcaggtgttc
aacatcaccccctgcccacttagtcaagatgtgcttctgtccctggtcaaccaactctca
catgatctttccacttttactgacctcaagatcaagtacctggaagaagctgttatgaac
ctggatgcctctcacccggtgacccgcgagcacatgcgaccagtgctgcaaggtttccaa
cgcaacctacatacgcacctggctgccaatcccaaccacaagaaggtcaagatgctgctc
atggccgtcaaccaccttgttgccttgtaa
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integrated database retrieval system
