Penaeus japonicus (kuruma prawn): 122266269
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Entry
122266269 CDS
T07703
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122266269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pja03019
]
122266269
Messenger RNA biogenesis [BR:
pja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
122266269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
122266269
NCBI-ProteinID:
XP_042891844
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MKEGEESDQEAFLRSRSLDQYVKTVMTHIRGCQKLSTELQGWHHYGDYVGVRNTMREVNT
RISNLITNIFQHQDIKLKLTHTKLLDQFDMVREGNDALLERINSDIDEASGLKKDIDFEP
TVKRVQAPASTTSPGKNVVLMASRNVQKPQLFFKEKVDNSKKEPFIPIITEKPNSLKPLS
ILICVDGNQEYYSHPYEYELNHWMPDPAQLEKVKPRRPRPLGQTPLTMVTEVQQLEALVE
ELKKCSEIAVDLEHHAFRSYQGLACLIQVSTRTKDYLIDPLALRGQLTILNEVFTNPKIT
KVLHGADFDILWLQRDCGVYVVNMFDTHQASVVLEYPHRSLAALLSKFCDIQANKVYQRA
DWRIRPLPEDFMEYARQDSHYLLYIYDLMRNELIERGNRLNNLITAVYSRSVDICLKRYE
KPFIGPDSHMDLYRRSRKAFDSKQMYALRELYLWRDNVAREQDESPDYVLPKHMLLQIAE
VLPKEMQGVLACCNPIPPLVKTELLTIHTIIRAAREQKLQLVQEDSTEGQLPPVQLQMEE
LNTGLVISKHDLSTVEENPRDLPTLLNPRETLLGDLFSQPRVEVKIQEISGMFGCEASHL
RHKGTMHTEITKEFMSPYERYTAYQELKPHLEGERKKRTETVDQAHIDRVKKHFLSLNKN
TPQRSSEEEVEESVQQKSSEEEMAEEKDDAAEKKRNKAKIKKQEEKKRKSIPLSLGEEIQ
ERKAANNAQKKRVVEKEGEAADEETDESPSKRLKTNEADVQPEEGAAEKKEGEEEDGECM
ESDKEDEESPAEEGPSGANDEGPAAFDYDKADYSIFEGKLGKKFKHKQKYSQKFRGRGGQ
RGRGFKSNMKSFSFGRGKKGTGGSQR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaggtgaagaatcagaccaggaagcctttttaaggagtagatccttagatcaa
tatgtgaagacggtaatgacacacattcgaggatgccagaagctaagcacggaactccag
ggatggcaccactacggagattatgttggggtccggaacaccatgagggaggttaacaca
aggatttctaacttgattaccaacatcttccaacatcaggacatcaaactgaaactgact
cacacaaaattgctagaccagtttgacatggtgagggaagggaacgacgccctactggag
agaatcaattcagacattgacgaggcatctggtctaaagaaagatattgattttgagcca
actgttaaaagagttcaggctcccgcatctaccacttcgccggggaagaacgtcgtcctt
atggcctcacgcaacgtccagaagccacagctgttcttcaaggagaaggtggacaactcg
aagaaggagcccttcatccccattattacggagaaacccaactccctcaagccactgtct
atcctcatctgcgtggacggaaatcaggaatactacagccacccctacgagtatgagctc
aaccactggatgccggaccccgctcagctcgagaaggtgaagcctcggcgtcccagaccc
ctcggccagactcccctcaccatggtgacggaggtgcagcagctggaggcactcgtcgag
gagctgaagaagtgctccgagatcgcggtcgatttggagcaccacgccttccggtcgtac
cagggcctcgcctgcttaattcaggtgtcgacaaggacgaaggactaccttatcgacccc
ctcgctctccggggacagcttaccatactcaacgaggtgtttaccaatcccaagattaca
aaggtgcttcatggtgcagacttcgacatcctgtggctccagagggactgtggcgtatat
gtcgtcaacatgttcgacacacaccaggcttcagtggtcctggagtacccacacaggtcc
ctggctgcgctgctctccaagttctgcgacattcaggccaacaaggtgtaccagcgagct
gattggaggataagaccactgcccgaggattttatggaatacgctcggcaagattctcac
tacctactctacatctatgacctcatgcggaatgagttgatcgagcgagggaatcggctc
aacaacttgatcacagccgtctacagcagatcggtagacatatgtttaaaacgctacgag
aagccattcatagggccagacagccacatggatttataccgtagaagtcgcaaagctttt
gactcaaaacagatgtatgctctgagggaactctacctctggagagacaacgttgctcgg
gaacaagatgagagtccggattacgtcttgccaaagcacatgctgctgcaaattgctgag
gtgctgcccaaggagatgcagggtgtgctggcctgctgcaaccccatcccacccctcgtc
aagaccgaactgctcacgatccacaccattatcagagcggccagggaacagaagcttcag
ctggtccaggaggattcgacagagggacagctcccgccagtccaactacagatggaggag
ctgaacacaggtctggtgattagcaagcacgacctgtcaacagtcgaggagaatccgaga
gaccttccgactctcctcaatcccagggagacgttgctcggggacctcttctcacagcca
agggtggaagtcaagattcaggagatttccgggatgtttggctgcgaggcgagccatcta
aggcacaagggcaccatgcacacagaaataaccaaggagttcatgagtccgtatgagagg
tacacagcctaccaggaacttaaaccccacctggagggagaacggaagaagcgaacggag
accgtggatcaggcgcacatcgatagagtcaaaaaacatttcctaagtctgaacaagaac
acaccacagaggagttcagaggaagaggtggaggagagcgtccagcagaagagctcagag
gaggagatggcagaggagaaagatgacgcagcagagaagaagcgcaacaaagcaaaaatt
aagaagcaagaggagaagaaacggaaatccatcccgttgtctttaggggaagagatccag
gaaaggaaggctgcaaacaatgcacagaagaaacgtgtggtggagaaagaaggcgaagca
gcggacgaggagacagatgagtcgccgagcaagagacttaagacgaatgaggcagatgta
cagcccgaggaaggggcagcagagaagaaggagggggaggaggaggatggagagtgcatg
gagtctgacaaggaggatgaggagtcacccgctgaggaagggccttcaggagcaaatgat
gaaggtcctgcggcctttgactacgacaaggccgattacagcatcttcgaaggcaagctg
ggcaagaagttcaaacataaacagaagtacagtcaaaagtttagagggaggggcggccaa
aggggtaggggctttaagtctaacatgaagagcttctcgtttgggagaggcaagaaaggc
accggtggatcacagagataa
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