Penaeus japonicus (kuruma prawn): 122266558
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Entry
122266558 CDS
T07703
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pja
Penaeus japonicus (kuruma prawn)
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122266558
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122266558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
122266558
NCBI-ProteinID:
XP_042892295
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MSNSCRTCGGSSFTVDNAVKMCDQCGTEQTNYAEYMSQEVLMEVDRSRFASQIADYVDEA
DAVDSKPKEALLNNWTSYEAFNIVLFEWTQALRSSGTSKNFQEMVFKLWVTYLQRMEVAF
LPLEEKKSKKPKASIIENIRDVQLIHRGREEVVSCSMKRKRKSSKKNESLDKIMKKVEAR
KLKKVNKNTLSNYLTAELSKSILEMEEDSSDWESGIMAIKKGKNKRKKSSRQSSAACSVA
GDDISEVNATIDELRAPVLCRNSFTTKHINKIRKVKGTDEKSETNPIEDENMKGSKEEEE
EEEPDKALDETEKPIQVIGKRTQNTTIDSFKVAKSYIQEALPFHLNYKKLLSLLYLAVLL
SEEDILLMDIMRWCREGHIPYLSAQNLLKQDMKMIREDLNVFRKWYVPTADTVQDAAGKM
AAFLSIQYIPLPREDLIIERFVDILRLPEGVSSLAKELVQQSKNHSHQNTSLRIPDLEAK
AMAAIISVVKLCYGLDGFQEVRLSQAAKTVNERLQDKPGWTHLFNWEEWERYMNTLLWFC
GQVDAVFAYHFKALGAGGVNAKILSQFYWEEGIWRTSKTTTNFGHTETAYKMVEKLVDFQ
GKPLEDMIDQNTVLRMSRNPLMDIVSHFLGKFKNDKDKSMQQLVKMGRRLQRKTFKTYQI
NWAANLKDVQAKIAKYGSDYILQPLTLVSYKGSHDKNIKLKKYHIRFYDEVEKDLLEELM
SEKSEKILLIPQPHRNVWRANWTNKKRNEVWSSCPSIYKWFISLSSLITETHRDRIMQYI
EVFEKLR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaactcgtgccgtacctgcggggggtcctcctttacggtggacaatgcagtcaaa
atgtgcgaccagtgcggcaccgagcagacaaattacgcagagtacatgagtcaggaggtg
ctgatggaagtcgaccgttcacgtttcgcctcgcagattgctgactatgtagatgaggca
gatgccgtggactcgaagcctaaagaggcgctcctgaacaactggacatcttacgaagcc
tttaacattgtcttattcgagtggacacaggctttgcgctccagtgggacttccaaaaac
tttcaggaaatggtgttcaagctttgggtcacgtatctgcagcgcatggaagtcgctttt
ttgccgctggaggagaagaagagcaagaaacctaaggcgtccattattgagaacataaga
gatgtacagctgatacacagaggacgagaggaagtggtttcatgctctatgaagcgtaag
cgaaagtcctcaaagaaaaacgagtcattggataagataatgaagaaggtagaagcaagg
aaactgaaaaaggtgaacaagaacaccttgagtaactacttaacagcagaactgagcaag
tcaattttagaaatggaagaggattcgtctgactgggagtcagggattatggccataaag
aagggtaagaataaacgaaagaaatccagcaggcagagctcagcagcctgcagtgttgca
ggagatgatatttctgaggtcaatgcaaccattgatgaattgagagccccagtgctgtgt
cgcaactccttcaccaccaaacatattaacaagatcaggaaagtgaaagggacagatgaa
aagtctgaaacgaatcccattgaagatgagaatatgaaaggctctaaggaagaagaagaa
gaagaagagccggacaaagcgctggacgagacagagaagccgatacaggtgatcggaaaa
aggacgcagaacactaccatagacagctttaaggtggcaaagagctacatccaggaggca
ctgccattccatctgaattacaagaagctcttaagtctactttatcttgcagttctgctc
tcagaggaggatattttgttgatggacattatgaggtggtgccgagaaggccacatcccc
tacctgtctgcccagaacttattgaagcaggacatgaaaatgatccgggaggacctcaac
gtgttcaggaagtggtatgtccccaccgctgatacagttcaggacgcagcagggaagatg
gccgctttcctctcaatccagtacatcccgctgccgagggaggatctgatcatcgagagg
tttgtggatatccttcggctgccagagggtgtgagttccttagccaaagagctggtacag
caaagcaaaaaccacagccaccaaaacacgtccctgcgcatcccagacctggaggcaaag
gccatggcagccatcatctcggtggtgaagctgtgttatggcctcgacggcttccaggaa
gtcaggctctcacaggcagccaagactgtgaatgaacgtctccaggacaagcctggctgg
acgcacctcttcaactgggaggagtgggaaaggtacatgaatactctgctatggttttgc
ggtcaagtagatgcagtatttgcataccacttcaaggcacttggtgcaggaggtgtgaat
gccaagattctttctcagttctattgggaagaaggaatttggagaacatcaaagactacc
acaaactttggccacactgaaacagcttacaagatggtagaaaaactcgtagacttccag
ggaaagcccttggaggacatgatagatcaaaacactgtgttgaggatgtcgaggaatcct
ttaatggacattgtgagccatttcttggggaagttcaagaatgacaaagataagtccatg
caacagctagttaagatggggaggagactgcagaggaaaactttcaagacttaccagata
aactgggcagccaatctgaaagacgtccaggcaaaaatagcaaaatatggctctgactat
attctgcagcctctgactctggtcagctacaaaggcagccacgacaagaacatcaaattg
aaaaaataccatatccgtttctatgatgaggtagagaaagacttactggaagaattgatg
tcggaaaaatcagaaaaaatcctgttgataccacagcctcacaggaatgtctggagggcc
aactggacaaacaagaagcggaatgaagtgtggagttcctgtccatcaatttacaaatgg
tttatcagcctcagcagcctgataaccgagacacacagagataggatcatgcagtacatt
gaggtgttcgaaaagcttagataa
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