Penaeus japonicus (kuruma prawn): 122267454
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Entry
122267454 CDS
T07703
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pja
Penaeus japonicus (kuruma prawn)
Pathway
pja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122267454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pja03021
]
122267454
Enzymes [BR:
pja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122267454
Transcription machinery [BR:
pja03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122267454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
122267454
NCBI-ProteinID:
XP_042893449
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
MTLAKGDCLASGPIVGVPVEVAKQLSYPEKVTSHNIKLMRQLVRNGPDVHPGALFVEPRS
TPGIKKSMRYVHRERMAHELKHGDIIERHLMDGDIVLYNRQPSLHKMSIMSHRVRVLPWR
TFRFNECVCTPYNADFDGDEMNLHVPQTEEARAEALVLMGVTSNLVTPRHGALIIGTTQD
FITGSYLLTQKDQFFDKEHTCTLVASILAGKESDYKVDLPPPATMKPQELWTGKQIFSLI
IRPNKTFPAACNLMAKRKDYTQGEELCANETWVVIRNSELLAGALDKSLLGSGSKKNLFY
VILKDYGKDHAADAMWRMARLSTLFLMDRGFSIGIGDVXAGSGLLTRKQELLDEGYGKCD
KFISQLKEGTLHCQPGCTAEETLEQLILKELSTIRDKAGKACVMELHKTNAALIMAISGS
KGSFINISQMIACVGQQAIGGKRVPNGFEDRALPHYGRHSKIPAAKGFVSNSFFSGMTPT
EFIYHTMAGREGLVDTAVKTSETGYMQRRLVKSLEDLYVGYDMTVRNSTQDIIQFKYGGI
AVPQMERGQNCEVLQLGEMYLEDDALRELSPKFKEELKTFLEKYSKRVEKIQSRFIKAIK
GKALPVERQLERLTFTQVIDFLNSCLDHYQSAVMEPGTAVGALCAXSIGGPGTQMTLKTF
HFAGVVAMNITLASPRILEIINASRSISTPIITAKVKLDTDPEMARQVKGRIEKTLLGEV
CEYVEEVFLPNDCFLLLKLAMDRIRYLKLEVDAHSIKYAICTSKLKVKEMDVCVESDATL
TVRPSKTKVSSLYYQLQRLKQHITKVIIKGLPSVNRAVINQNDTSGISQYELLVEGDNLQ
EVIATYGVDGTRCTSNNTYEVFTSLGIEAARLSDVIKEITVTMETHGLSVDHRHVMLLAD
LMTCRGQVLGITRHGLSKMKESVLMLASFEKTADHLFDAAYHGQSNPIKGVSDCIIMGKP
MNIGTGVFKLLHSHKRDAKPRTRNLIFDHPELHVPLVHNGWS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgacacttgccaaaggcgattgtctagcctctggtccaattgtgggcgtaccagttgag
gtggcaaagcagctatcgtacccagagaaggtgacgtcacacaacatcaagctcatgcgt
cagctggtgcggaatggtccggacgtccaccctggggccctctttgtggaacccaggtca
acaccgggcatcaagaaatcgatgagatatgtgcacagggaacggatggctcacgaactg
aaacatggggacattattgagagacatctgatggatggagacattgtcctgtacaaccgc
cagccttctctacacaagatgagcatcatgtcccacagagtcagggttctcccatggagg
accttcaggttcaatgaatgtgtctgcactccttataatgccgatttcgacggggatgag
atgaacctccacgtgccgcagactgaggaggcgagggcagaggcgttggttctcatgggg
gtgacctccaacctggtgaccccaagacacggagcgctcatcatcggcacaacccaggat
ttcatcacaggttcctacctcctcacgcagaaagaccagttcttcgacaaggagcacacc
tgcacccttgtagcctccatcttggcggggaaggagtccgactacaaagtggatctgcca
cctcctgccactatgaagcctcaagaactgtggacgggcaagcagattttcagcttgatc
atccggcccaacaagacttttcctgcggcctgcaacctgatggccaagcgcaaggactac
acacagggggaggagctgtgcgccaacgagacctgggtggtgatccgcaactcagagctc
ctggcgggggccctcgacaagtccctgctgggctcgggttccaagaagaacctcttctac
gtcattctcaaggattacggcaaggaccacgcggccgacgccatgtggaggatggcccgg
ctctccacgctgttcctgatggaccgtgggttctccatcggcattggtgacgttnatgcg
ggatcggggctgctcaccaggaagcaggagctgctcgatgaaggatacgggaaatgcgac
aaattcatctcgcagctgaaggaaggaacactgcactgccagccaggttgtactgcggag
gagaccctagagcagctgatcctgaaggagctcagcaccatccgagacaaggcgggcaag
gcgtgtgtcatggagctgcacaagaccaacgcagcacttatcatggccatctctggctcc
aagggttccttcatcaacatctcgcagatgattgcgtgcgtcggacagcaggccataggg
ggcaagagggtccccaacggctttgaggaccgtgcgctgccacactacgggagacactcc
aagatccccgcagccaagggtttcgtaagcaacagcttcttctcgggcatgacacccaca
gaattcatctaccacaccatggccggacgagagggcctggtcgacacggctgtcaagacc
tcagagactggctacatgcagcgccgacttgtcaagtctcttgaggacctgtatgtgggg
tatgacatgactgttcggaattcgacacaagatattatccagtttaagtatggagggata
gctgttcctcagatggagagggggcaaaattgtgaggtgctgcagcttggcgagatgtac
ctggaggatgatgccctcagggagctatctcccaagttcaaggaggagctcaagactttc
ttagaaaagtactccaagagggtggaaaagatacaatcacggttcatcaaagccattaag
gggaaagcccttcctgtggaacgccagctggaacggctcacttttacgcaggtcattgac
ttcctcaactcgtgcctcgaccactaccagagtgctgtgatggaaccgggcacagctgtg
ggtgctctctgtgcctagagtattggaggaccaggcacacagatgacactgaagactttc
cattttgctggagtagttgcgatgaacattacccttgcttcccctagaatcctggagatc
atcaacgcgtcgcggagcatctcaacgcccatcattacggccaaggtcaagttagacact
gacccagagatggcacgtcaggtcaaaggccgcattgagaagacccttctgggggaggta
tgcgagtacgtggaagaggtgttcctacccaatgattgcttcctgcttctcaaactggcc
atggaccgcatcaggtatctcaagctcgaggtggacgctcactcgatcaagtacgccatc
tgcacgtccaaactcaaggtgaaagagatggacgtgtgtgtagaatccgacgccactctc
accgtccgtccctcgaagaccaaggtgtcgtccttgtactaccagctgcagcgcctcaag
cagcacatcaccaaggtcatcatcaagggcttgccatctgtcaacagggctgtcatcaac
cagaacgacacaagtgggatttcccagtatgaactgcttgtggaaggagacaacttgcag
gaggtcattgcaacctatggtgttgacggcacgcgttgcacctcaaacaacacgtatgaa
gtcttcacctctttagggattgaggcagcaaggttgagcgacgtcatcaaagagatcacg
gtgacaatggagactcacggcttgagtgtcgatcacaggcacgtcatgctgctggctgat
ctgatgacgtgccgcggccaagtacttggcatcacccgccatggtctctctaagatgaag
gagtcggtgctgatgcttgcctcgtttgagaagacggctgaccacctgttcgacgcggcc
taccacggccagagcaaccccatcaagggtgtgagcgattgcatcatcatggggaagccc
atgaacatcggcacgggtgtgttcaagctcctccacagccacaagagagacgccaaaccc
cgaacgcgcaaccttatcttcgaccacccagagctccacgtcccccttgtccacaatgga
tggtcttaa
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integrated database retrieval system
