Paenibacillus sp. JDR-2: Pjdr2_0297
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Entry
Pjdr2_0297 CDS
T00977
Name
(GenBank) alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00946
Degradation of flavonoids
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Pjdr2_0297
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
Pjdr2_0297
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
DUF4965
Motif
Other DBs
NCBI-ProteinID:
ACS98977
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Position
354782..357490
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AA seq
902 aa
AA seq
DB search
MQKIIRLRCEYNYNPIGIQTTQPRFSWELESSKRNCNQTAYQIIVSNSEKDTFSGIGALW
DSGKVESAETFHIEYTGSPLASGQRCYWTVKCWDQDGTLYEAEESAFFEMGILNSDEWTA
QWIGADETIASPLFRTSFHIHKPIKQASIAVSGLGYFELYMNGERVGDHVLVPNWTDYDD
RKIEGLLYSFDDQTSKRVHYLQYAVTDHVRQGENAIGVILGNGFYNQTERTIEGKMRYGA
PKLILQMALTYEDGTVDYIRSDEGWKCSSGPIVFNNVFYGEIYDARLEQPGWDDYGFDDS
TWEQARLVRSPKGQLTAQMSPPDKKISTLKPISRAEPKPHIYIFDFGQNFSGWVRIRMQG
EAGQQVTLRFAENLAPDGGLDTLSCGGNDQIQSDTYIMKGEGIEQYEPRFVWHGFRYVEV
TGYPGVPDLTDLEGIVVHVSVESTGEFTCSDPLLNQVQSAYRWSQLTNMHGGVPSDCPHR
ERLGYTGDGHLTAEAASYNFDMAAFYAKWIGDISDSQNKQTGFVPHTAPFNGGGGGVAWG
SAYIIMPWTMYRLYGDRRLLAEHYDGMKSWISYLSTRNRGGYLVEFEEPDSWFLGDWCIP
GANELPPTLVSTFYYAYTVRMMSEIAGVLGHNEDGKQYAELFDLICAAFIEAFFDPETAT
YSIGRQGADLFPLVLGCVPEGYEDHVWERVLRHYRDDLGGHLDTGIFGTFFLFELLSERG
ETDLALKMVAAKDYPGYGYMIENGATTLWESWDGHDSHNHPMFGSVSSWFYKHVAGLAQH
PDSVAFDQAVFKPFQAASLNHASASVHTIRGQYAIRWSREDSSSWACEIQIPPNCTAEVH
FPLKNRNALISSIFEQGCNRNIWPSSDTDESPDTIQWSTEPNDIVVTLGSGQYEFLVTIN
PE
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcattcgactacgctgtgagtacaattacaaccccattggcatacaaaca
actcagcctcgcttcagctgggagcttgaatcctccaaacgcaattgcaaccaaactgcc
tatcagatcatcgtatccaatagtgaaaaggatacgttctccggaatcggcgctctgtgg
gattcaggcaaagtcgaatctgccgagacctttcatattgagtatactggcagcccactc
gctagcgggcaacgctgttactggacggtcaagtgttgggatcaggatggaacgctatac
gaagctgaagagtctgcttttttcgagatgggaattcttaactcggacgaatggactgca
cagtggataggagcagacgagacgattgcatcaccgttattcagaacctccttccacata
cataaaccaattaagcaggcgtccatagcagtgtcgggactgggctattttgagctatat
atgaacggcgaacgagtaggtgatcatgtcctggttccgaactggacggattatgatgat
cgcaagatcgaagggctgctctattctttcgacgatcagacttccaagagggtccattat
cttcaatacgctgtgacggaccatgttcggcagggtgagaacgcgattggagtgattctt
gggaacggcttctacaatcagaccgagagaacaattgaaggaaaaatgcgatatggcgct
ccaaagttaatattgcagatggctctaacctacgaggatggtacggtagattacatccgc
agtgatgaaggctggaaatgcagctccggaccaattgtattcaataatgtcttctacgga
gaaatctatgatgcgaggctggagcagccggggtgggatgactacggttttgatgattcg
acctgggaacaagcccgcttggttcgttctccgaagggccagctgacggctcagatgtct
cctccggataaaaagatcagcacgctcaaaccaatctcccgtgccgagcccaagcctcac
atctacattttcgatttcggtcaaaacttttccggttgggtgcgcattcgtatgcaaggg
gaggccgggcagcaggttacgctaaggtttgcggaaaacctcgctccagatggcgggctg
gatacgctaagctgcggtggtaacgaccaaattcaatccgatacttacatcatgaaaggc
gaaggtatagagcaatacgaaccccgatttgtctggcatggttttcgttatgtggaggtc
accggatatcccggagtaccagacctaacggatctcgaaggcatcgttgttcatgtttcg
gtagaatcaaccggcgagttcacctgttctgacccgttactcaatcaagtgcagagcgct
tatcgctggtcgcagcttacgaatatgcatggcggcgtgccaagcgattgtccgcatcgt
gaacgactcggatacacaggggatgggcacttgactgcggaggcggcgagttacaacttt
gatatggctgctttttatgcgaagtggattggtgacatcagcgattcgcagaacaagcag
acgggttttgtgccgcatacggctccgttcaacgggggtggaggtggagtcgcttgggga
tccgcgtatatcatcatgccgtggacgatgtaccgtttgtatggagatcgtcgtctgctt
gctgagcattatgatgggatgaaaagctggatcagctatctaagtacgcgtaatcgcgga
ggatatctagttgaattcgaagaaccggacagctggtttctgggagattggtgtatccct
ggagcgaatgagcttcctcccactctagtgagcacgttctactatgcctatacggtaagg
atgatgtccgaaatcgccggagtgcttggtcataacgaggatggcaagcagtatgcggaa
ctgtttgatcttatttgtgcagcatttatcgaggcgtttttcgatcccgaaaccgccact
tactccataggtcggcaaggtgcggatctgttcccgcttgttctgggatgcgttccagaa
ggttacgaggatcatgtgtgggagcgggtgctgaggcattaccgtgatgatctaggcggg
catttggataccggtatattcggaaccttcttcttgtttgagctgctgagtgagcggggg
gagacggatctagcgttaaagatggtcgcggcaaaagactaccccggctacggctacatg
atcgaaaatggcgccaccaccctgtgggaatcctgggatggacatgactcccataatcat
ccgatgttcggaagtgttagttcctggttctacaagcatgttgctggattagctcagcat
ccggattccgttgcgttcgatcaggctgtctttaaaccgttccaagctgcgagtttaaac
cacgcgtccgcatcggtccatacgattcggggtcaatatgctattcgctggtccagagaa
gatagcagtagctgggcctgtgagatccagatcccgccaaactgcacggcagaagtccat
tttccgttaaaaaaccgcaatgcccttatctcatccatcttcgagcaaggatgcaaccga
aacatatggccgtcatctgatacagacgaatctccggacacgatccagtggagtacggaa
ccgaacgatatcgtcgtcacattaggttcaggtcaatacgaattcctggtgaccattaat
cccgagtaa
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