Paenibacillus sp. JDR-2: Pjdr2_0492
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Entry
Pjdr2_0492 CDS
T00977
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00061
Fatty acid biosynthesis
pjd00071
Fatty acid degradation
pjd01100
Metabolic pathways
pjd01212
Fatty acid metabolism
pjd02024
Quorum sensing
pjd04146
Peroxisome
Module
pjd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pjdr2_0492
00071 Fatty acid degradation
Pjdr2_0492
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pjdr2_0492
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pjdr2_0492
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pjd01004
]
Pjdr2_0492
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pjd04147
]
Pjdr2_0492
Enzymes [BR:
pjd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pjdr2_0492
Lipid biosynthesis proteins [BR:
pjd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pjdr2_0492
Exosome [BR:
pjd04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pjdr2_0492
Exosomal proteins of breast cancer cells
Pjdr2_0492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACS99172
LinkDB
All DBs
Position
585664..587628
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AA seq
654 aa
AA seq
DB search
MDKADPENPLVPEDRQKPPNSAPNETPLSPRQEEAAAPQLVEAEPPAAESAAPSAEAEPS
VAAAATDSAPDEEPAPEEAVASATSEGPEAPVEIPKPWLRHYPLEIPASLDYPNHGIPQF
LINAVEKFPANEAVHFLGKSLTYRELYDHTCRLANGLISLGVNRGDRVAIMLPNCPQAVI
SYYAALMIGAVVVQTNPLYVERELEHQLKDSGAATIITVDLFYQRLANVRGEFPEAGAVP
QLKNAVITSLKDGLPFPKNLLYPLKQRKEGFKADIPYGRHGVVSYKKLISSSSNLPVLTD
IHGSDLAQLQYTGGTTGTPKGVMLTHRNLVANTMQTSAWCYRVKDGYERFLAALPLFHVF
GLTVLMNFSIMRAGSLVLLPRFETETVLDTISRQQPTLFPGAPTMYVALINHKNSASTDL
SSIEACISGSAALPLEVQEQFEKMTGGKLIEGYGLTEASPVTHANLIWGKRKIGTIGMPF
PDTIAAIFSPEGKPLPVREVGELVIRGPQVMKGYWNNPEESEIVLRGGWLHTGDLGYMDE
DGFFTIVDRIKDVIIAGGFNIYPREVEEVLYEHPGVMEASVLGVKDPYRGETVKAFVVLK
KGSYVSAAQLDVWCRQRLAAFKVPHLYEFRESLPKTMIGKVLRRKLMEELEKEQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggataaggcagatccggaaaacccgcttgtacccgaggatcggcaaaagccgcccaat
tccgcacctaacgaaacgccactatcgccacggcaggaggaagccgcagccccgcagctc
gtagaagcagagccaccggcggcggagtcagcggctccgtccgcggaggccgagccaagc
gtagcagctgccgcgacagactccgccccggacgaagagccggctcccgaggaagccgtt
gcttccgcgacttcggaggggcccgaggctccggtcgagattcctaagccgtggctgcgg
cactatccgctggagatcccggcttccctggattacccgaatcatggcattccgcagttc
ctcattaatgccgtggagaaattcccggcgaacgaagccgttcattttctgggcaaatcg
ctcacctatcgcgagctgtacgaccatacctgccgattggcgaacggtctaatctcgctt
ggcgttaaccgcggcgaccgagtggcgattatgctgccgaactgtccgcaggcggtaatc
tcttactacgccgctctaatgattggcgccgtggtagttcagaccaatccgctctatgtg
gaacgggagctggagcatcagttgaaggacagcggtgccgcaaccatcattaccgtcgat
cttttctatcagcgccttgccaacgtacgcggcgaatttccggaagcgggggctgttccc
cagctcaagaatgcggttattacgtcgctgaaggacggacttccttttccgaaaaatctc
ctctacccgctcaagcagcgcaaagaaggcttcaaagcggatataccttacggccgtcac
ggagtcgtttcctataagaagcttatttcctccagctccaatcttcccgttctgaccgat
attcacggcagcgatctcgcccagcttcaatataccggaggtacgaccggaacaccgaaa
ggggtgatgctgacgcaccggaatctggtggccaatacaatgcagacctcagcctggtgc
tacagggtgaaggatggttacgaaagatttctggcggcactgccgttatttcatgtattt
ggtttaaccgtgttaatgaatttttctattatgcgcgcaggttcactggtgcttctgccg
cgttttgagaccgaaaccgtgctcgataccatcagccggcagcagccaacgctgttcccg
ggcgcgccaacgatgtatgtggctctgatcaatcataagaattcagccagcaccgatctt
tcctcgatcgaggcctgtatcagcggatcggcggcgctgccgcttgaggtgcaggagcag
ttcgagaaaatgaccggcggcaagctgatcgaaggctatggcctgacggaagcttcaccg
gtaacgcatgccaatctgatctggggcaaacgcaaaatcggcacgatcggcatgcctttt
cccgatacgatagccgcgatcttcagtccggaaggcaagccgcttcccgttcgcgaggtt
ggcgagcttgtcattcgcggtccgcaagtgatgaagggatactggaacaatccggaagag
agcgaaatcgtgctgaggggtggctggctgcataccggcgaccttggctatatggacgaa
gacggcttttttacgattgtagaccggattaaggatgtcattatcgcgggcggtttcaat
atttatccgcgagaggtcgaagaggtgctgtatgagcatcccggcgtaatggaagcctcc
gtccttggggtgaaggatccgtaccgcggcgagacggtgaaggctttcgttgtacttaaa
aaaggctcctacgtatcggcggcccagctcgacgtctggtgcaggcagcggcttgccgcg
tttaaggtgccgcatctgtacgaattccgggagtctcttccgaagacgatgatcggcaag
gtcttaaggcgcaagctgatggaggagctggagaaggagcaataa
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