Paenibacillus sp. JDR-2: Pjdr2_0731
Help
Entry
Pjdr2_0731 CDS
T00977
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00730
Thiamine metabolism
pjd01100
Metabolic pathways
pjd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pjdr2_0731
Enzymes [BR:
pjd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pjdr2_0731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACS99410
LinkDB
All DBs
Position
complement(848813..850576)
Genome browser
AA seq
587 aa
AA seq
DB search
MPILSTPLPGSRKTYVRGSREDIRVPMREIVLSDSRGKDGQPQPNEPVRVYDSSGPYTDE
SYEADVRKGLPVLRGGWISDRGHTEAYDGRIIKPEDNGFSDEERAKKNGEEIFPCLNHRP
LHAKPGRNVTQLHYARKGIVTPEMEFIAIREGVDPELVRSEVARGRAVIPANINHPELEP
MIIGSRFHVKINANIGNSAVASSIEEEVEKMTWATRWGADTIMDLSTGKNIHTTREWIIR
NSSVPVGTVPIYQALEKVNGKAEDLNWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTA
KRVTGIVSRGGSIMAAWCLAHHKENFLYAHFEEICGIMKAYDVSFSLGDGLRPGSIADAN
DEAQFAELRTLGELTEIAWKHDVQVMIEGPGHVPMHLIKENVDLQMEICKEAPFYTLGPL
TTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKEDVKDGVIAYKIAAHAAD
LAKGHPMAKLRDDALSKARFEFRWRDQFHLSLDPERAIAYHDETLPAEAAKTAHFCSMCG
PKFCSMRITQDIREYAEARGLNNEAALEAGMKEQADSFKMSGSKLYG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccgattttatcaacgccgctaccgggcagccgcaaaacgtatgtgagaggatcgagg
gaagatattcgggttcccatgcgcgaaatcgtattatccgacagtcggggaaaagacgga
cagccgcagcccaacgagccagtgcgggtgtatgactcaagcggcccgtacacggacgag
tcctacgaggccgatgtgcgtaaaggactccctgtcctgcgcggcgggtggatcagcgac
cgcggccacacggaagcttacgacggccggatcattaagccggaagataacggattttcg
gacgaggaacgagcaaagaagaatggcgaggaaattttcccttgcctgaatcaccggcct
cttcacgcaaaaccggggagaaacgtcacgcagcttcactacgcccgcaaaggcatcgtg
actccggaaatggagtttattgcgattcgcgaaggggttgatccggagctggtccgttcg
gaagtggcccgcgggcgcgcggttataccggccaatatcaaccatcccgaactcgagccg
atgatcatcgggagccgtttccatgtgaagattaacgccaacatcggcaattcggccgtt
gcgtcctccattgaagaggaagtcgagaaaatgacgtgggcaacccgctggggagcggat
acgattatggacttgtccacgggaaaaaacatccatacgacacgcgaatggattattcgc
aactcttccgttcccgttggcacggtgccgatttaccaggcgcttgaaaaagtgaacgga
aaagcggaagacctgaactgggaagtgttccgcgatacgttaatcgaacaagctgaacaa
ggcgtcgattatttcactattcatgccggcgtgctgctgcgttacatcccgcttacggcc
aaacgcgttaccggcatcgtttcccggggcggctccatcatggctgcctggtgtctcgcc
caccacaaggaaaacttcctctacgcccactttgaagaaatatgcgggattatgaaagcc
tacgacgtgtcgttttcgcttggagacggccttcgtccaggctccattgcggatgctaac
gacgaagctcaattcgcggaactgagaacgcttggagaattgacggaaatcgcttggaag
catgatgttcaggtgatgatcgaaggcccgggccacgttcccatgcatttgatcaaagaa
aacgtcgacctccaaatggagatctgcaaggaagcgccgttttataccctggggccgctc
acgacggacatcgcacctggctacgaccatatcacatcggcgataggagcagcgatgatc
ggttggttcggaacggcgatgttatgctacgtaacgcctaaagaacatctgggcctcccc
aataaagaagacgttaaagacggtgtcatcgcctacaaaatagcagcgcatgccgcagac
cttgccaaaggacatccaatggcgaaactccgggacgacgccctgtcgaaggcaaggttc
gaattccgatggcgcgaccagttccatttgtcccttgatcccgaacgggcgatcgcctac
catgacgagacgctgcccgccgaggcggcgaaaacagcgcacttctgctcgatgtgcgga
ccaaagttctgcagcatgcggattacgcaagacatccgggaatatgcggaagcacgcgga
ctgaataacgaagcggctttggaagccggaatgaaggagcaggcggattcgttcaaaatg
tccgggagcaagctatacggctga
DBGET
integrated database retrieval system
