Paenibacillus sp. JDR-2: Pjdr2_0901
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Entry
Pjdr2_0901 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_0901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_0901
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pjdr2_0901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA
AAA_30
IstB_IS21
DEAD
AAA_15
TsaE
RsgA_GTPase
AAA_29
AAA_5
SbcC_Walker_B
AAA_23
SRP54
ResIII
AAA_18
AAA_25
DUF87
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ACS99580
LinkDB
All DBs
Position
complement(1071624..1073402)
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AA seq
592 aa
AA seq
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MARNKFDIDENLESPFNIKHFRRALVYIKRQKKPMIIAFVLSALSAGIALSAPLIMQHVV
DVTIPAKDKGGLVWLSMLMLATIVVSVILATIRSRIMTRVGQDIIFDIRTDLFKHLQELP
FQYYDDRPQGKILIRVVNYVNSVSDVLSNGIINLILEILNLIFIAAFMFAVDARLSLLIL
GGLPIFIGIMLLIKTKQRRAWQAVSNKSSNMNAYLQESISGIRVTQIFTREKHNEGTFTR
LSVNYRSVWMRAMYFNFLVPFSVDNLTTLVTTSIYFVGLLALSPAEVTFGVILAMSSYAA
RFWQPILNISNLYNSFINAVAYLERIFETLDEPVTVSDVPDARELPAIKGRVTFDDVTFA
YDPGVNVLQNLKFDVKAGESIALVGPTGAGKTTVVNLISRFYNVTQGQILIDGNDIADVT
LKSLRSQMGIMLQDSFIFSGTIMDNIRYGKLDATEEEIIAAAKTVCADDFIREFEHGYMT
EVNERGSKLSQGQRQLISFARTLLANPRILILDEATSSIDAQTERLLQKGLNELLKGRTS
FIIAHRLSTVKNCDRIMYVADKGIAEAGSHDELMAQRGRYYKLYTAQKMEAM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaataaattcgacatcgacgagaatctggagtcgccctttaatatcaagcac
ttcaggcgtgctctcgtctatatcaagcgccagaagaaaccgatgattatcgctttcgtg
ctgagcgccctgtcagcgggtatcgcgctctccgcacctctgatcatgcagcatgtggtt
gacgtaacgattccggccaaggataaaggcgggcttgtctggttatcgatgttaatgctt
gcgaccattgtggtcagcgttattctggcgacgatccgctcccgcattatgacccgtgtc
gggcaggatattatcttcgatatccgcaccgatctgttcaagcatttgcaggagctgccg
ttccaatattacgacgaccgcccgcaaggcaaaattctgatccgcgttgtcaattacgtc
aactcggtatccgatgttttgtccaacggtatcatcaacttgattctggagattctcaac
ctgatctttatcgcggcgtttatgttcgcggttgacgccagattgtctcttcttatcttg
ggaggtctgccgatctttatcggcatcatgctgcttatcaagacgaagcagcgccgcgca
tggcaggcggtatcgaataagagctccaatatgaacgcttatctgcaggagagcatcagc
ggcattcgcgttacgcaaatctttacccgggaaaaacataacgaaggcaccttcacccgc
ttgtcggtcaactatcgcagcgtgtggatgagagccatgtatttcaacttccttgttccg
ttttcggtagataacctgacgacgctcgtaacgacttccatttatttcgtaggtctcttg
gcgttaagcccggcagaagtcacctttggcgttattctggcgatgagcagctacgcggcg
cgcttctggcagccgatacttaacatttccaacttgtataacagctttatcaacgctgtc
gcctatctggaacggatcttcgagacgctggacgaaccggttaccgttagcgatgtgcct
gatgcgcgcgagctgccggctatcaaaggccgggttaccttcgacgatgtgaccttcgct
tacgatcctggcgtcaacgtccttcagaacctgaagtttgacgtgaaggctggcgaaagc
atcgcgcttgtaggtcctaccggcgcgggcaaaacaaccgtcgtcaatctgatctcgcgt
ttttacaatgtcacccaaggccagattctgatcgacgggaatgacattgcggacgtgacg
ctgaagtcgctgcgcagtcagatgggcattatgcttcaggacagctttatcttctccggc
acgataatggacaacatccgctacggcaagctggacgcaacggaagaagagattattgcc
gcagccaaaaccgtatgcgcggacgatttcatccgcgagttcgagcatggctatatgacc
gaggtaaacgaacgcggttcgaagctttcccaaggacagcgtcagctgatctcgttcgcc
cgcacgctgctcgcgaatccgcgcatccttattctcgacgaagctacttcgtcgattgat
gcccagaccgagcgcctgctccagaagggtctgaacgaattgcttaagggacggacttcg
ttcattatcgcgcaccgtctgtccacggttaagaactgcgaccggattatgtacgtagcc
gacaaaggcatcgcggaagccggctcgcatgacgagctgatggctcagcgcggccggtac
tacaagctgtacacggctcagaagatggaagccatgtaa
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