Paenibacillus sp. JDR-2: Pjdr2_1606
Help
Entry
Pjdr2_1606 CDS
T00977
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K24072
positive control factor
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pjd03021
]
Pjdr2_1606
Transcription machinery [BR:
pjd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pjdr2_1606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
HTH_29
HTH_10
MarR_2
HTH_24
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ACT00275
LinkDB
All DBs
Position
1880249..1880737
Genome browser
AA seq
162 aa
AA seq
DB search
MKEFKDLERAYRATHKRLRAALVKTGENGSHPDENIIRGAISDVNFAIGWMQTGKRPGSK
RGIERRGIYANTKLVDPLTLQSYANPINSRSGSSLTEDEKELLREALDLLSDQERECYVM
SHGHGLTHAYIAEVMKLSKSAVASYIKRAHEKVSKDWQRTLF
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttcaaagacctggagcgtgcataccgggcgacacataagaggctgcgtgca
gcgctggtgaagactggagaaaacggcagtcatccggatgagaacattatccgcggcgcg
atctcagatgtgaacttcgccattggctggatgcagaccgggaagcggccggggagtaag
cggggaattgagcgtagggggatttacgctaatacgaagctggtcgatccattaacactt
cagagttatgcaaatccgataaacagccgcagcggcagctcattaacggaagatgaaaag
gaactattgcgcgaagcgctggatctactgagcgatcaggaacgcgaatgttacgtgatg
tcccacggccacggattgactcatgcttatatcgctgaagtgatgaagttatcaaagagt
gcagttgcatcctatataaaacgagcacatgaaaaagtgtctaaggactggcagcgcacg
ttgttttaa
DBGET
integrated database retrieval system
