Paenibacillus sp. JDR-2: Pjdr2_1908
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Entry
Pjdr2_1908 CDS
T00977
Name
(GenBank) Collagen triple helix repeat protein
Organism
pjd
Paenibacillus sp. JDR-2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
ACT00565
LinkDB
All DBs
Position
complement(2253056..2255551)
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AA seq
831 aa
AA seq
DB search
MATGPIPITASQLGSLQNLLTDLSNLLPNVLENPTSSRVSQLNTILNELRSLVLSIDFDA
DEQSALLSLLENQITLVETAPFSPLGTVILTESLINILGADALLFNIPPASKDSLIGQIR
TISRQLALILPVISPSSGPQGPTGPQGPAGIAGIAGIAGIAGPAGPAGPAGPAGPAGPAG
SAGPAGPAGAAGPVGPAGADGAIGATGATGATGAGLAGITVYNPLSSSTYPFGQLVVYEG
DTYLVLVSNPTGEPDSSPDYLYLSGDPTGATGATGATGATGATGVTGDIGLAGATGATGD
TGATGATGATGNTGANGATGDTGATGATGNTGATGATGATGATGATGDTGATGATGATGA
TGNTGANGATGDTGATGATGNTGANGTTGATGATGDTGATGATGDTGATGDTGATGDTGA
TGDTGATGDTGATGATGDTGATGDTGATGDTGATGATGDTGATGDTGATGDTGATGATGA
TGATGATGATGATGATGATGATGDTGATGATGATGATGATGATGDTGATGATGDTGATGT
TGATGATGATGDTGATGDTGATGATGATGDTGATGDTGATGATGATGDTGATGDTGATGD
TGATGTTGATGATGVTGDTGTTGATGTTGATGATGATGVTGATGVGATGATGATGSAGSG
AIIPFASGTPAVLTTVLGGLLNTSTLTAFGTNAAGVTVAGGTIDLTGAAGLLLNMAFSAP
RTGTITSLAAYFSTTAALTLVGSTVTITAQLFESATPNNTFTAVPGALVTLSPSLTGVLA
LGTISSGLTTGLSIPVAAGTRLLLVFSASVTAGLDIATTVAGYASAGLTIV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggccactggtccaattccaattacggcatcacaattaggttccttgcaaaatttatta
accgatttgtccaatctgctgccaaatgttctagagaacccgacatctagccgcgtatct
caactgaataccattttaaacgagcttcgatcacttgtattaagcattgattttgatgct
gatgaacagtccgcgctgctttcccttctggaaaatcagattacccttgtcgaaactgcg
ccattttctccgcttgggacggttattttaacggagtctcttatcaatatacttggagcg
gacgcattattatttaatattcctccagcctccaaggactccctcattggccagatccgg
accatttcccgccagcttgcccttattctccctgtaattagcccgtcatccggacctcaa
ggtccaaccggtcctcagggacctgcgggtattgcgggtattgcgggtattgcgggtatt
gcgggacctgccggccctgccggacctgccggacctgccggacccgctggacctgcagga
tctgctggacctgcaggcccggcaggagctgcaggcccagttggtccagccggggcagat
ggcgcgattggcgcgaccggcgctactggggcgaccggggcgggtctcgccggcattacc
gtctacaacccgctaagttcttcgacttatccttttggccagcttgtcgtctatgaaggc
gatacttatttagttctggtctcgaatccaacaggtgaaccagactcttctcctgattat
ttatatctttccggagatcctaccggcgcgactggggcgaccggagcaacgggtgcgacc
ggagcaacgggcgtgacgggtgacattggtttagctggcgctacgggcgctactggcgac
actggcgcgactggggcaacgggggcgactggtaataccggtgcaaatggagcgacaggt
gatactggcgcgactggggccaccggtaacaccggcgctaccggcgcgaccggcgctacc
ggcgcgaccggcgctactggcgacactggcgctacgggggcgactggcgctacgggggcg
actggtaataccggtgcaaatggagcgacaggtgatactggcgcgactggggccaccggt
aacaccggcgcaaatggaacaacaggcgctaccggtgcgaccggcgacactggcgctacc
ggcgctactggcgacactggtgctaccggcgacactggcgctaccggcgacactggcgct
accggcgacacgggcgctaccggcgacactggcgctaccggcgctaccggcgacacgggc
gctactggcgacactggcgctactggcgacactggcgctaccggcgcgacgggcgacact
ggcgctaccggcgacactggcgctaccggcgacacgggcgctactggcgctactggggct
actggcgctactggcgctactggcgctactggcgctactggcgctactggcgcgacgggc
gctactggcgacacgggcgctactggggctactggcgctactggcgctactggcgcgacg
ggcgctactggcgacacgggcgctactggggctaccggcgacactggcgcgacgggcact
actggcgctactggcgcgactggcgcgaccggcgacactggcgcgactggcgacactggc
gcgaccggcgctactggtgctaccggcgacactggcgcgaccggcgacactggcgcgacc
ggcgctactggtgctaccggcgacactggcgcgaccggcgacacgggcgcgaccggcgac
acgggcgcgactggcacaacgggcgctactggcgcaacgggcgtaaccggcgacactggc
acaacgggtgcgactggcacaacgggcgcgaccggagctaccggcgctactggcgttacc
ggagctactggcgtaggcgctactggcgcgaccggtgcgacaggctcagccggctccggg
gctattattccgtttgcttccggtacgcctgccgtcttgactactgtactgggagggctg
ttgaacacctctacattgaccgccttcggaaccaacgctgcgggcgttacggttgcaggc
ggcacaattgacttgaccggtgcagcaggtctgcttctgaacatggcattttccgcgccg
cgtaccggaacaatcacctcgttagccgcatacttcagtacaacggcagccttaactctg
gtgggctcgacggtaactattacagcccagctcttcgaatccgcaacgccaaacaatacg
tttacggctgtgcctggtgccttggtgaccttaagtccgtctctgacaggagttcttgct
ctcggtacgatttcttccggtctaactacgggactctctattcctgtagcagcgggtact
cgcctgctccttgtcttctcggcttccgtcacagcggggctggatatcgccacaaccgtt
gccggatatgcaagcgcgggattaaccatcgtataa
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