Paenibacillus sp. JDR-2: Pjdr2_2316
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Entry
Pjdr2_2316 CDS
T00977
Name
(GenBank) DNA repair protein RecN
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
pjd
Paenibacillus sp. JDR-2
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pjd03400
]
Pjdr2_2316
DNA repair and recombination proteins [BR:
pjd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pjdr2_2316
TLS (translesion DNA synthesis) factors
Other SOS response factors
Pjdr2_2316
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_22
ABC_tran
AAA_16
AAA_15
RsgA_GTPase
nSTAND3
MutS_V
FliS
Motif
Other DBs
NCBI-ProteinID:
ACT00972
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Position
2695174..2696883
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AA seq
569 aa
AA seq
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MLRELSIRNLAVIEEVNVSFHHGFHVLTGETGAGKSILIDALSLIVGGRGSADMVRYGCD
KAEMEAMFDLPSQHPVWAVMERLGVQAPREEMLVIRRELTAHGKSSSRVNGQLVTMTMLR
EIGECLVNIHGQHEHQSLLRTEQHLEWLDLFAGDLLIERKTAYKAVYQQLQQARSSVREL
EETTRHNVQMLDLYRYQIEEITNANLKDGEDEHLLEERRKLQYAGKRMDSVSEAYALLYN
GKGLDAISKAISKLTDIQSYDPAVLTPMLEQLQSAYYQAEDAVFQLRDYRDSIDSDPGQL
SVIEDRLDLINGLKRKYGETIPDILQYLDRITEERDKIENRDEYLDKLRKDELRLYLQAH
ELAQELSELRSHASERLAAAIELELKQLQMGNTIFRVQLDHPTASETSEMAALNANGIDE
AIFMLSTNPGEPLKPLNKIASGGEMSRIMLALKAIFAEIDQVPVLVFDEVDTGVSGRAAQ
AIAEKMSQLSSKCQIFSITHLPQVACMADHHYEIKKHIIEQRTSTNVTKLVEHSRIEELA
RMLGGVEVTEKTRHHAQEMLVLADRQKGA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgagctatccattcggaatttagccgttattgaggaagtaaacgtttcgttt
catcatggatttcatgtattaacaggtgagacaggtgcagggaaatcaattctaattgac
gcacttagcttaattgttggtggacggggctccgcagatatggtcaggtatggctgtgat
aaagccgagatggaggcaatgttcgatttgccgtctcaacatccggtatgggcggtaatg
gagcggcttggggtacaggctccaagagaagagatgcttgttattagacgagagctgact
gctcatggcaagagcagcagccgtgttaacggccagcttgtcacgatgacgatgctgagg
gagatcggtgaatgcctcgttaatatccatggccagcatgagcatcaatcgctcttgcgc
accgaacagcatctggaatggctggacttgttcgcgggcgatctgctgattgagcggaag
accgcctacaaagctgtgtaccagcagcttcagcaagcccgttcatccgttcgcgagctt
gaagagacaacccgccataatgttcagatgctggatttgtaccgctaccagatcgaagag
atcacaaatgccaacctgaaggacggcgaggatgagcatttattggaggaacgccgcaag
ctgcagtatgcaggcaaacggatggactctgtatccgaagcatacgccttgctgtataac
ggtaaagggctcgatgctatcagcaaggcgatcagcaagctgaccgatatccagtcttat
gatcctgcagtgctgacacctatgcttgaacaacttcagtctgcttattatcaagccgag
gatgcggtatttcagcttcgcgattaccgtgacagcattgattctgatcctgggcagctg
tccgttattgaagacaggctggatttgatcaatggactgaagcgcaaatacggagagacg
attccggatattcttcaatatttggatcgcattacggaagagcgtgacaaaattgaaaac
cgcgatgagtatttggataagctgcgcaaggatgaactgcggctgtatttgcaggcacat
gaattagcgcaggagctgtccgagcttcgttcccatgcatccgaacgtctcgcggccgca
atcgagcttgagcttaagcagcttcaaatgggcaatacgattttccgggtacagttggat
catccgacagcgagtgaaacgtctgagatggcggctctaaacgctaacggtatagatgaa
gcgatctttatgctgtcgacgaatccgggcgagccgctcaaaccgcttaataaaattgct
tccggcggtgaaatgtcccgaattatgcttgcgcttaaagcaatctttgccgagattgat
caggtgcctgttctggtctttgatgaagtggatactggcgtcagcggcagagcagcacag
gccattgccgagaaaatgtcgcagttgtcgtccaaatgccagatcttctcgattacgcat
ctgcctcaagttgcttgtatggctgatcaccattacgaaattaagaagcatattattgaa
caacgtacttccacaaatgtcacgaagctggtggagcactcgcgtattgaagaacttgcc
cgcatgttgggcggcgttgaagtaacggaaaaaacccgccatcatgctcaagaaatgctt
gttttggcggatcggcagaagggagcctaa
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