Paenibacillus sp. JDR-2: Pjdr2_2338
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Entry
Pjdr2_2338 CDS
T00977
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00550
Peptidoglycan biosynthesis
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pjdr2_2338
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pjd01002
]
Pjdr2_2338
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Pjdr2_2338
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pjdr2_2338
Peptidases and inhibitors [BR:
pjd01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Pjdr2_2338
Peptidoglycan biosynthesis and degradation proteins [BR:
pjd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Pjdr2_2338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
ACT00993
LinkDB
All DBs
Position
2716910..2718127
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AA seq
405 aa
AA seq
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MKKVCTKLFILFAAFALTAMPAAANANAVISAKEPVPGAQGQQQQTASLDLAPSARSAVL
MDADSGTVIYEKDSNVKLPPASITKVMTMLLIMEALDDGKIKLTDKVPTSEYAASMGGSQ
IFLEPGEEMTVDEMLKGIAMASGNDASVAMAEKLAGSEQQFVVMMNEKAQQLGLQNTHFA
NCNGLPAADHYTSAHDIAVMSRELLKHSEITKYTGSYQDYLRKTSEKPFWLVNTNKLVRF
YSGADGLKTGFTNEAKFCLTATAKRDNLRVIAVVMGEPNTKTRNAEVSQMLDFTFAQYTT
HPIFKEGDTMGTIKVEKGAVREIPLVAKHPYSILLKKGAATQDIRYELQIDQPLKAPVAI
GQSIGKLVVYQGDQVVKEFPVDAPQSINKAGWFKLLKRSFGGLFS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtttgtacgaagctgttcattctattcgctgcatttgccctaaccgcaatg
ccagctgctgctaacgccaatgccgtaattagcgcgaaagagcccgttcccggtgctcaa
ggccaacagcagcagaccgcatcgcttgatctagcaccctccgcgcgttccgcggtcctg
atggacgcggacagcggaaccgttatttacgagaaggacagcaacgtcaagcttcctccg
gcgagcattacgaaggtcatgacgatgctgctgatcatggaagcattggacgacgggaaa
atcaaactgaccgacaaggtgccaactagcgaatacgcggcttctatgggcggttctcag
attttcctggaacccggtgaagaaatgacggttgacgaaatgctgaaagggatcgcgatg
gcttccggcaacgatgcctctgtcgctatggcggaaaagcttgcgggatcggagcagcag
tttgttgtaatgatgaatgagaaagcgcagcagctgggcttgcaaaatacgcattttgcc
aactgtaacggtctgcctgcagctgatcattacacctccgcgcatgatattgcagtcatg
tcgcgcgagctgctgaagcattccgagattacgaaatacaccgggtcataccaggattat
ttgcgcaagacttcggagaaaccgttctggctcgtgaacacgaacaagcttgtaaggttc
tacagcggagccgacggtctcaaaactggcttcacgaatgaagcgaagttctgcttaacg
gcaacggccaaacgcgacaatctgcgagtgatcgcagtcgtgatgggcgagccaaacacc
aaaacaagaaatgccgaagtatcgcaaatgcttgacttcactttcgcgcaatacacgacc
catccaatcttcaaagaaggggatacgatgggcacaatcaaggtcgagaagggcgcagtg
cgcgaaataccgctggttgctaagcatccttacagcattttgctcaaaaaaggagcggca
acgcaggatatccgttatgagctgcaaatcgatcaaccgcttaaagcgccggttgcgatc
ggacaatccatcggcaagcttgtcgtctaccaaggcgaccaggttgtgaaggagttcccg
gtagacgcgcctcagtcgattaataaagccggttggttcaagctgctgaaacgttccttc
ggagggctcttctcttag
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