Paenibacillus sp. JDR-2: Pjdr2_2386
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Entry
Pjdr2_2386 CDS
T00977
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pjdr2_2386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pjd03011
]
Pjdr2_2386
Ribosome [BR:
pjd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pjdr2_2386
Bacteria
Pjdr2_2386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
OB_RRP5_4th
CSD
Motif
Other DBs
NCBI-ProteinID:
ACT01041
LinkDB
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Position
2759508..2760743
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AA seq
411 aa
AA seq
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MSEEINVQDQAAMDNFVSLKKGDTVKGTIIKIDDNQAYVSLGYKYDGVIPVRELSAVQLD
NANDAVQVGQEVELKVVSIDDEKEKLVLSKRLIDGERAWDGLQSRFESGEVFEVAVADVV
KGGLVADVGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKEIDRENNKVILSAKDVLDAE
FEQNKQHVIAGLQVGAQLEGTVQRLTPFGAFVDIGGIDGLVHVSELSWQHVAHPKDVVSE
GQQVTVKVLKVDPAAGKISLSIKAAQPGPWESAAGQFNVGDIVTGTVRRLVTFGAFVEIA
PGVEGLVHISQIAHRHIATPFEVLKEGQEVQAKVLDFNPAEKRVSLSIKETEEAPEQPAA
EQAPKAGRPQRERTPQVKPEDLGNNPNVSLNSSSMSYSLAERFGDKLSKLK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaatcaatgttcaagaccaggcagcaatggacaactttgtgtccttgaaa
aaaggcgatactgttaaaggtacaatcatcaaaatcgatgataaccaagcttatgtaagc
cttggatataaatatgacggtgtcattccggttcgcgagctttccgctgtgcaactggat
aacgcaaacgatgccgttcaagttggccaagaggttgaactgaaggttgtcagcatcgac
gacgagaaagaaaagcttgttttgtctaagcgcctgatcgacggcgagcgcgcttgggac
ggtctgcaaagccgcttcgaaagcggtgaggtattcgaagtagcagttgctgacgttgta
aaaggcggcctcgtggctgacgttggcgtacgcggcttcattcctgcttcgatggtagag
cgtcacttcgttgaagatttcagcgattacaaaggccgtacgctccgcgttaaagtgaaa
gaaatcgaccgcgagaacaataaagtgatcctgtcggcaaaagacgtgctggacgctgag
ttcgagcaaaacaaacaacatgtcattgccggcctgcaagttggcgcacagctggaaggt
actgtacaacgccttacaccgtttggcgcattcgttgatatcggcggcatcgatggtctg
gttcacgtatccgagctgtcctggcagcatgttgctcatccgaaggatgttgtatccgaa
ggccaacaggttacggttaaagtacttaaagttgatcctgcagcaggcaaaatcagcctg
agcatcaaagcagctcaaccgggcccttgggaatccgctgccggccaattcaacgttggc
gacattgtaacgggtacggttcgccgccttgttactttcggcgcatttgttgaaatcgct
ccaggcgttgaaggccttgtgcacatctctcaaatcgctcaccgtcacatcgcaactcct
ttcgaagtattgaaagagggccaagaagtgcaagcgaaagtgcttgatttcaaccctgcg
gaaaaacgcgtaagcctgagcatcaaagaaacagaagaagctcccgagcagcctgctgct
gagcaagctcctaaagcgggcagacctcaacgtgagcgtactcctcaggttaagcctgaa
gatttgggcaacaacccgaatgtcagcttgaacagctccagcatgagctactcgctggct
gagcgtttcggcgataagctgagcaaattgaaataa
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