KEGG   Paenibacillus sp. JDR-2: Pjdr2_2386
Entry
Pjdr2_2386        CDS       T00977                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K02945  small subunit ribosomal protein S1
Organism
pjd  Paenibacillus sp. JDR-2
Pathway
pjd03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pjd00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Pjdr2_2386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pjd03011]
    Pjdr2_2386
Ribosome [BR:pjd03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Pjdr2_2386
  Bacteria
    Pjdr2_2386
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 RNase_II_C_S1 OB_RRP5_4th CSD
Other DBs
NCBI-ProteinID: ACT01041
LinkDB
Position
2759508..2760743
AA seq 411 aa
MSEEINVQDQAAMDNFVSLKKGDTVKGTIIKIDDNQAYVSLGYKYDGVIPVRELSAVQLD
NANDAVQVGQEVELKVVSIDDEKEKLVLSKRLIDGERAWDGLQSRFESGEVFEVAVADVV
KGGLVADVGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKEIDRENNKVILSAKDVLDAE
FEQNKQHVIAGLQVGAQLEGTVQRLTPFGAFVDIGGIDGLVHVSELSWQHVAHPKDVVSE
GQQVTVKVLKVDPAAGKISLSIKAAQPGPWESAAGQFNVGDIVTGTVRRLVTFGAFVEIA
PGVEGLVHISQIAHRHIATPFEVLKEGQEVQAKVLDFNPAEKRVSLSIKETEEAPEQPAA
EQAPKAGRPQRERTPQVKPEDLGNNPNVSLNSSSMSYSLAERFGDKLSKLK
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgtcagaagaaatcaatgttcaagaccaggcagcaatggacaactttgtgtccttgaaa
aaaggcgatactgttaaaggtacaatcatcaaaatcgatgataaccaagcttatgtaagc
cttggatataaatatgacggtgtcattccggttcgcgagctttccgctgtgcaactggat
aacgcaaacgatgccgttcaagttggccaagaggttgaactgaaggttgtcagcatcgac
gacgagaaagaaaagcttgttttgtctaagcgcctgatcgacggcgagcgcgcttgggac
ggtctgcaaagccgcttcgaaagcggtgaggtattcgaagtagcagttgctgacgttgta
aaaggcggcctcgtggctgacgttggcgtacgcggcttcattcctgcttcgatggtagag
cgtcacttcgttgaagatttcagcgattacaaaggccgtacgctccgcgttaaagtgaaa
gaaatcgaccgcgagaacaataaagtgatcctgtcggcaaaagacgtgctggacgctgag
ttcgagcaaaacaaacaacatgtcattgccggcctgcaagttggcgcacagctggaaggt
actgtacaacgccttacaccgtttggcgcattcgttgatatcggcggcatcgatggtctg
gttcacgtatccgagctgtcctggcagcatgttgctcatccgaaggatgttgtatccgaa
ggccaacaggttacggttaaagtacttaaagttgatcctgcagcaggcaaaatcagcctg
agcatcaaagcagctcaaccgggcccttgggaatccgctgccggccaattcaacgttggc
gacattgtaacgggtacggttcgccgccttgttactttcggcgcatttgttgaaatcgct
ccaggcgttgaaggccttgtgcacatctctcaaatcgctcaccgtcacatcgcaactcct
ttcgaagtattgaaagagggccaagaagtgcaagcgaaagtgcttgatttcaaccctgcg
gaaaaacgcgtaagcctgagcatcaaagaaacagaagaagctcccgagcagcctgctgct
gagcaagctcctaaagcgggcagacctcaacgtgagcgtactcctcaggttaagcctgaa
gatttgggcaacaacccgaatgtcagcttgaacagctccagcatgagctactcgctggct
gagcgtttcggcgataagctgagcaaattgaaataa

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