Paenibacillus sp. JDR-2: Pjdr2_2489
Help
Entry
Pjdr2_2489 CDS
T00977
Name
(GenBank) ABC transporter transmembrane region
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_2489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_2489
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pjdr2_2489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
FtsK_SpoIIIE
DEAD
AAA_29
AAA_16
DUF87
DUF815
RsgA_GTPase
AAA_23
AAA_14
MeaB
ABC_ATPase
MMR_HSR1
AAA_22
TsaE
CRA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACT01144
LinkDB
All DBs
Position
2860180..2861964
Genome browser
AA seq
594 aa
AA seq
DB search
MDVFRQLKRFYWVERRYLLSSIICLMFATALGLVYPNLLRYLIDNVIKPKDFDKVPMLAL
TVVGVVTLKGFMQFLHGFFGGRLGNRVVFRMRNACYDKLQTLSFQYYDKAKTGDLMSRLT
ADLEAIRQFIGFGFAQILNVALMILFGGAMMMSIDWRLTLITLVTIPFLAFTAIRFEKRI
HPAFREMRKAMSNLTTAVQENITGVRTVKSFAREPHEVDKFSKRNEQYKANQIGASSIWA
KFFPSMELLANVSVVILLVAGGTMVIRGSLTLGELVAFFSLIWYIIGPMWGIGFHINNYT
QSKASGERIMELLNTHVHVQSIENAVEVDKEVVRGHVRFENVTFNYPDKTPAVTNINIDA
PPGKVVGLLGATGSGKSTIIQLMMRAYNVKTGRVTLDGIDIQNLDVQTLRSQIAPVFQET
FLFSASIRTNIAYGEKNVTDEQIIRAAKLAKAHDFIMELPLGYDTIVGERGMGLSGGQKQ
RIAIARALIRNPRILILDDATSAVDMETEHEIQAGFKELMAGRTTFIIAHRISSLRHADE
IIVLDNGHIVQRGTHNELIAEHGPYRETYNIQYADRPLANLDSSVPERKRSVVQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
ttggacgtctttaggcaattgaaacggttttattgggttgagcgaaggtacctgctgtca
tccattatttgtttgatgtttgcgaccgcgcttggcctggtgtatccgaatttgctgcgt
tacttgattgacaatgttatcaagccaaaagactttgacaaagtgccgatgttagctctt
accgtcgtaggggtcgttaccctgaaaggattcatgcagtttctgcacggattttttggc
ggcaggctcggcaaccgggtagtcttccgcatgcgcaacgcctgttacgacaaacttcaa
acgctttcatttcaatattacgataaagcgaaaaccggcgatttgatgtcgaggctaacg
gccgatcttgaagcaatacgccaatttatcggctttggctttgcccagattctgaacgtg
gcgctgatgattctgttcggcggagcgatgatgatgtcgatcgactggaggctgacgctg
attacgctggtcacgatcccgttccttgcttttacggcaatccgcttcgagaaacggatt
catccggccttccgcgaaatgcgtaaagcgatgagtaatctgacaacggcggttcaggaa
aatattacgggcgtgcggacggtcaaatcctttgcccgcgaacctcatgaggtagataaa
ttctcaaagcgcaacgagcaatacaaggcgaaccagattggcgcctcctcgatttgggcg
aagtttttcccatcgatggagcttctcgccaacgtaagcgtcgtcatcctgctggtggca
ggcggtacgatggttatccgcgggtctttaacgcttggcgaactggtagccttcttcagt
ttaatctggtacatcattggtccgatgtgggggattggcttccatatcaataactatacc
cagtccaaagcctccggcgagcggattatggagctgcttaatactcatgttcatgtccaa
agcatcgaaaacgccgttgaagtggataaagaagtggttagaggccatgtccgctttgag
aacgtgacgtttaattatccggacaaaacgcctgcggtcacgaacattaacatcgacgca
ccgccgggcaaagttgttggtctgcttggggcaacgggctcgggcaaatccaccattatt
caactcatgatgagggcttataacgtaaaaacgggccgggttactcttgacggcatcgat
attcagaatctggatgtccaaaccctgcgcagccaaattgcgccggtatttcaggagacc
ttcctgttctcggcttcgatccgtaccaacattgcctatggggaaaaaaatgtaacggac
gaacagattatccgcgcagccaagcttgcgaaagcgcatgatttcattatggagctgccg
cttggctatgatacgatcgttggcgagagagggatgggcttatccggcggacagaagcag
cgtatcgcgattgcccgcgccctgatccgtaatccccggattcttattctggacgatgcg
accagcgccgtcgatatggagacggaacacgagatccaggccggctttaaagagctgatg
gccggacggactacgtttatcattgcgcaccggatttcctcgctccgccatgcagacgaa
attatcgtactcgataacggacatatcgtgcagcgcggtacgcataacgagctgattgcc
gagcatggaccttatcgcgaaacctataacattcaatatgccgatcggccgcttgcgaac
ctcgattcttcggtaccggagcggaaaaggagcgttgttcaatga
DBGET
integrated database retrieval system
