Paenibacillus sp. JDR-2: Pjdr2_2523
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Entry
Pjdr2_2523 CDS
T00977
Name
(GenBank) glycoside hydrolase family 2 sugar binding
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00052
Galactose metabolism
pjd00511
Other glycan degradation
pjd00600
Sphingolipid metabolism
pjd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Pjdr2_2523
09103 Lipid metabolism
00600 Sphingolipid metabolism
Pjdr2_2523
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Pjdr2_2523
Enzymes [BR:
pjd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Pjdr2_2523
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Glyco_hydro_2_N2
CBM_6
Invasin_D3
Big_1
Motif
Other DBs
NCBI-ProteinID:
ACT01178
LinkDB
All DBs
Position
complement(2900043..2903516)
Genome browser
AA seq
1157 aa
AA seq
DB search
MSQKQKLNNDWFFSKHPLGTELDAILQGGIDWSPITLPHDWLIYDSNNLYENSIGWYRKA
IRFEDLPANKKFALRFEGVYMNSTVYVNGRVAGTWKNGYSTFEFDITSLLTRGENEILVQ
VIHESPNSRWYSGAGIYRPVWLITSPDTRIASDGIYISAKKNTSGTWSVDIDTEVVFANL
TDSSGIKLRHTILDAAATVISQSEALIQPESGSTAAFNQVLAVQQPRLWDLDEPSLYKLQ
TELIVEGNVLDSEEQNFGFRTFDFDTEKGFFLNGRPVKLQGVCQHHDLGSLGAAVNKTAL
RRQIALLQEMGVNAIRTAHNMPAVELMELADEMGVLIVSEAYDMWERAKTPYDFARFYKD
WWKKDIASWVRRDRNHPSMLMWSIGNEIYDTHADERGQTLTVELRDKVHFHDPKGNAVVT
IGSNYMPWENAQKCADLVQFAGYNYGDKYYKQHHEEHPDWYIYGSETCSTVQSRGIYHFP
LAQSVLADDDEQCSSLGNSSTSWGAKSTEACIIADRDAAFSLGQFLWTGFDYIGEPTPYH
TKNSYFGQIDTAGFKKDAFYIYQAEWTDYRVKPMVHIFPYWDFSEGQLIDVRVSSNAPKI
ELFFNDNSLGTYDIDHVHGQKLLGEWQIPYTKGILRAVAYDESGNVIATDIQSSFGDAET
VLLTPDKTAIAADGSDLVFIEISALDRNNLPVANANNRIHVTVEGPGRLVGLDNGDSADY
DSYKGTNRRMFSGKLLAVIAPTLESGTITVRAVSNGLAAGEVTLTAVAPEPSTPGNENTL
YAYAPGQAAETSSGSAASDDEIPVRKLEIICPQGNALSAENRALPVQVVIHPSQATYRDV
EWRVTNAAGVDANIATLEADGHHAAVNALSDGEFYIRCATKNGADNIRLYSLMEFRTDGV
GQAFINPYEFVSAGYHSESSRNLTNGNERGVATSRDGESWICFDNIDFGSYGADEITLPI
FSLDSERFTIDLWEGIPGEPSASLLAQITYQKPTKWNVYQEETYRLPRRLTGITSLSFVL
QRKIHLSGFQYKKAIKAFERLEALENNQIYGDTYTLTDQTIENIGNNVSLVFRDMDFGDT
GTSKLAICGQSPIDNNTIHILFSGADGETKQLVEFAYTEDYCEKEYALERITGLQTVTFM
FLPGSQFNFKSFQFLPE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaacaaaagctgaataatgactggtttttctccaagcacccactcggtaca
gagcttgatgccatcctgcaaggcggtatcgactggtcgcctattacactcccgcatgac
tggttaatctatgactctaacaatctgtatgagaacagcatcggctggtaccgcaaagcg
atccgcttcgaagaccttcccgcaaataagaagtttgcgcttcgctttgaaggcgtttac
atgaattcgacggtttatgtgaacggtcgtgttgccggtacgtggaagaatggctactcg
acctttgaattcgatatcacctccttgcttacaaggggcgaaaatgaaattctcgttcag
gttattcatgaatctccgaactcccgctggtattccggggcaggaatttacaggccggta
tggctcattacctcgccggatacccgtatcgcctccgacggcatttatatttccgctaaa
aagaatacaagcggtacctggtctgttgatatcgataccgaggttgtatttgcaaacctc
accgattcttccggaattaagcttcgacatacgatcctggatgccgcagcgacggttatt
agccagtccgaagcccttattcagccggagtccggctcgaccgcagccttcaaccaggtg
cttgcggttcagcagccgaggctttgggatctagacgagccgagcctctacaagctccaa
acggaattaatcgtcgaaggtaacgtattggattcggaagagcaaaacttcggcttccgc
accttcgatttcgataccgagaaaggcttcttcctgaatggccggcctgtcaagcttcaa
ggggtttgtcagcatcatgacctcggttctcttggcgctgccgtcaacaagacggccctg
agaagacaaatagccctcctacaggaaatgggcgttaacgcgatccggacagcccacaat
atgccggcggtcgagctgatggaattggccgatgagatgggcgtgcttatcgtctccgaa
gcgtacgacatgtgggaacgggcgaagacgccgtacgactttgcgagattttacaaggac
tggtggaaaaaagatatcgccagctgggtccgcagagaccggaaccatccaagcatgctg
atgtggagtatcggcaatgaaatctacgatacccatgccgacgaacgcggacagacgctg
acggtagaacttcgggacaaagtgcatttccatgatccgaagggcaatgccgttgtcaca
atcggttcaaactatatgccttgggagaatgctcagaaatgcgccgatctggttcaattc
gccggctataattacggggacaaatattataagcagcatcatgaggagcatccggactgg
tatatttacggcagcgagacctgctcgacggtacaaagccggggtatctatcacttcccg
ctcgcccagtccgttctggcggacgacgacgagcaatgctcctcgcttggcaacagctct
actagctggggagcaaaaagcacggaagcctgcattatcgctgaccgtgatgccgccttc
tccctcgggcaatttctgtggacgggcttcgattacatcggagagccaaccccttaccat
acgaagaactcctatttcggacagatcgatacggccggcttcaagaaggatgccttctat
atttatcaggcggaatggaccgattatcgcgtgaagccaatggttcatattttcccctac
tgggatttctcggaaggacagctgatcgatgtacgcgtctcttcgaatgcgccgaagatc
gagcttttcttcaacgataattcccttggaacgtatgacatcgatcatgtccacggccag
aagctgctcggagaatggcagattccttatacaaaaggtatccttcgggctgttgcttat
gacgagtcgggcaatgtgattgcaactgacattcaatcctccttcggtgacgcggaaacc
gtcctgctgacaccggacaaaacagcgatagccgcagacggctcggatctggtctttatc
gagatctctgctctcgaccggaataacttgccggtagccaatgccaataaccgtattcac
gtgaccgtagaagggcccggccgactcgttgggctcgataacggggacagcgccgattat
gattcttacaaaggaacgaaccgccgcatgttcagcggcaagcttctggcagtcattgcg
cctacgctggagagcggaaccattaccgttcgtgcagtatccaacgggttggctgccggt
gaagtgacgctgacggctgttgctcctgaaccatcaacaccgggtaatgaaaatactctg
tatgcctatgcacctggacaagctgcggagacttcaagcggatcagccgcttccgacgat
gagattcccgtgcgcaagctggaaattatttgtccgcaaggaaatgcgctttcggcggag
aaccgggctttgccggtacaagttgttattcatccaagtcaagctacgtatcgggatgtt
gaatggcgggtcacgaacgctgccggtgttgatgccaatattgcaacccttgaggcagac
ggccatcatgctgccgttaatgccctaagcgacggcgaattctatatccgctgcgcaaca
aagaacggagcggacaatatccgcctttattctttaatggagttccggaccgacggtgtc
ggacaagcttttattaatccgtatgaattcgtatccgcaggctaccatagcgaatcgagc
cgcaatctgacgaacgggaatgaacgcggcgtagcgacaagccgggacggcgaaagctgg
atttgctttgacaacatcgacttcggcagctatggtgcggacgagattacgctgccgatc
ttctcgctggacagcgaacggttcactatcgatctatgggaaggtattcctggcgagcct
tcggcttccctgcttgcccagatcacgtatcaaaagccgaccaaatggaatgtgtaccag
gaagagacgtatcgtttgccccgccggcttacaggcattacgtccctcagctttgttctg
cagcgcaagattcacctgagtggcttccagtacaagaaagcgatcaaagcatttgaacgt
ctggaggcgctggaaaacaaccagatttacggagatacttatacgctgacggatcagacg
atcgagaacattggcaacaacgtctcgctggtgttccgggacatggactttggggataca
ggcacaagcaagcttgcgatctgcggtcaatcgcctatcgacaacaatacgattcatatc
ctgttcagcggtgctgacggcgagaccaaacagctggtggagtttgcgtacacggaagat
tattgcgagaaagaatacgctcttgagaggatcaccggccttcagacggtcactttcatg
ttcctgccaggcagtcaattcaacttcaaatcgttccaatttctcccggagtaa
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