Paenibacillus sp. JDR-2: Pjdr2_2679
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Entry
Pjdr2_2679 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_2679
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_2679
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pjdr2_2679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
MMR_HSR1
AAA_30
AAA_16
DEAD
AAA_29
RsgA_GTPase
MeaB
SbcC_Walker_B
DUF4136
AAA_5
nSTAND3
DUF87
AAA_7
AAA_23
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACT01332
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Position
3097534..3099342
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AA seq
602 aa
AA seq
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MSQVEWDDDSEIEEKPFNPAYMKRLLGYLKPYRKTLTIIIGVVLVNMILSLAEPLLLGYL
IDDGITKGDFHAIHLFGITLLGIKLIGWGCGWVHTKYINFTGQRILYDLRQQLFNHLQKL
SFRFFDGRPAGKIMSRITNDTNAIGELINGGLITTVMEVTHLVGIVAILLWMDWKLALLS
FIMMPLLYLIVNRLRPRIEGAWTRSRKTMSAINGHLNETIQGIRVVQAFSRQHKNSARFE
GINFRNKQAFMRAIMLESTVYPLVELVGMIGTCIVVWFGAKQVMDGALTIGFVMAFINYL
WRFWGPLSALSKVYSQVLSAMASAERIFEILDTDAEVTDAAYARRMPAIRGEVAFENVSF
RYEESKPDVLHNVSFKVRPGQRVALVGPTGAGKSTIVNLLMRFYDATGGKVTIDGLDVKD
VTLESLRRQMGIVLQDSFIFSGTIEQNLRYGNDGATMEQMIQASESVRLDRVVASMNEGY
DTEVEERGSKLSVGQRQLLAFGRVLLSDPRILILDEATSSVDTETEQHIQEALETLLNGR
TAFIIAHRLSTVRDADLILVVQDGRIAEQGSHNELMKQGGLYAKLVNTQLNMQEAVLTQV
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtggaatgggacgacgacagcgagattgaggagaaaccctttaatcccgcg
tatatgaagaggcttcttggatatttaaagccttatcgcaagacgctgaccatcattata
ggcgttgtccttgtcaatatgattttaagcctggcggaacctctgctgcttgggtatttg
atcgacgatggcattacaaaaggggattttcacgctattcatctgttcggtattaccttg
ctcggtatcaagctgatcggctggggctgcggctgggtacataccaaatacattaacttt
accgggcagcgcatcttgtacgatctacgccagcagctgtttaatcatttgcagaagctg
tccttccgcttcttcgacggacgtccggcagggaaaatcatgtcgcgtattaccaatgat
acgaacgcgattggcgaactgataaacggcggactgatcacaaccgttatggaagttacg
cacctggtcggaattgtggcgattcttctctggatggactggaagcttgcgcttctgtcc
ttcattatgatgccgcttctgtatcttatcgtgaaccggctgcgcccgagaattgaaggg
gcatggacccgttcgcgcaagacgatgtcggccattaacggacatttgaacgaaacgatt
caaggcatccgcgtcgttcaggcattctcgcgtcaacataaaaacagcgcaaggttcgaa
gggatcaacttccggaacaagcaggctttcatgcgcgccattatgctggaatcaaccgta
tatccgctggttgagctggtgggaatgatcggtacttgtatcgttgtatggttcggagcc
aaacaagtcatggacggtgcgcttactatcggttttgttatggcttttatcaattacttg
tggcgcttctggggaccgctcagcgctttgtccaaggtgtacagccaagtgctgtcggcg
atggcttccgcagaacggatctttgaaattctggatacggatgcagaggtaacagatgcc
gcctatgcgcgccgtatgccggcgatccgcggtgaagtggcgttcgaaaacgtatcgttc
cgctatgaagaatcgaaaccggatgtgcttcataacgtcagctttaaggttcgtccggga
cagcgtgttgcgcttgttggaccaacgggggcggggaaaagtacaatcgttaatctgctt
atgcggttctatgatgcaaccgggggcaaagttacgattgacggactagatgtcaaagac
gtaaccctggaatctctacgcagacagatgggaatcgtactccaggattcgtttattttc
tcgggaacaatcgaacagaacctgcgttacggcaatgacggggcaacaatggagcaaatg
attcaagcttcggaaagcgtacgtctggaccgtgtcgttgcgtccatgaatgagggctat
gatacggaggtagaggagcggggttcaaagctgtcggttggccagcggcaactgcttgca
ttcggaagggtgctgctgtccgatccgcggattcttatcctggatgaagcaacctcaagc
gtagataccgagacggagcagcatatccaggaagcgctggagactttgctgaacggacgc
accgcttttatcatcgcgcatcgtctctcgacggtacgcgacgcggatcttattctggtt
gtccaggacggacgaatcgcggagcaaggctctcacaatgaattgatgaagcagggcggc
ctgtatgcgaagctggtaaatacgcagcttaacatgcaagaggctgtgttaacgcaagtt
gaagcttag
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