Paenibacillus sp. JDR-2: Pjdr2_2902
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Entry
Pjdr2_2902 CDS
T00977
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pjdr2_2902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_2902
Transporters [BR:
pjd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Pjdr2_2902
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Ortholog
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TctC
Motif
Other DBs
NCBI-ProteinID:
ACT01550
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Position
3335082..3336272
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AA seq
396 aa
AA seq
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MLSKKSTLTLLTVTTVTAALLAGCGNSNKSDTANAGATNAGATNTASADPSAQQVEFSFY
FTGSENVKNLWDTIIPMFEKDHPNIKVKEVYIPSGTGAQPTYDRILAAKQAGKGSGGIDL
YEDGLSNVTQGQKDDLWETLDPAKIGNLASVDANTMKDVSNLAIPYRSSAVVLAYNSEKV
QTPPKTLDELFAWIKANPERFAYNDPSTGGAGSSFVTTTLYDKLSEDAIHNSDPSIEKEW
DKGFDTLKELGKYVYGKGIYPKKNQGTLDLLISGEVDMIPAWSDMALEQIGNGQLPATTK
IAQITPGFNGGPTYLMVPKLSEKKDAVNEFLNFVLSPEAQSVVVTKMHGFPGIQLSNMPQ
DIQDSFKGVAEGFRTFNIGDLGNEINKRWQSDVAAQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcaaaaaatccacccttactttactgactgtaacaaccgttaccgcagcactt
ctcgcgggttgcggaaactcgaataaatcggataccgcgaacgctggcgcaacaaacgcc
ggagcgacgaatacggcctcggcggatccgtcggctcagcaagtcgaattcagcttctat
ttcacgggctccgagaacgtgaagaatctatgggatacgattataccgatgttcgaaaag
gaccatccgaacataaaggttaaagaggtgtatattccatccggcacaggcgcgcagccg
acgtacgaccgcattctcgcggcgaagcaggcgggcaaaggttccggcggtatcgatctg
tacgaggacgggctgagcaacgtaacccaaggacaaaaggatgatctgtgggaaacgctt
gatccggcaaaaatcggcaatctcgcttccgttgacgcgaatacgatgaaagacgtatcc
aacttggccattccataccgttcatccgccgtggtgcttgcttacaacagtgagaaagtg
cagacgcctccgaagacgcttgacgagttgttcgcttggattaaagcgaatccggaacgc
tttgcttacaacgatccttccacaggcggcgcaggcagctcgtttgtgacaacaacgctg
tacgacaagctttctgaagatgcgattcataactccgatcctagcattgagaaggaatgg
gacaaaggattcgatacgctgaaggaactcggcaaatacgtatacggtaaaggcatttat
ccgaagaaaaaccaaggcacgctggatctgctcatcagcggcgaagtagacatgatcccg
gcatggtcggacatggctcttgagcaaatcggtaacggccagcttccggctacgacgaaa
atcgcgcaaattaccccgggcttcaacggcggcccgacctacttgatggtaccgaagctt
tccgagaagaaggacgcagttaacgagtttctgaacttcgtgttgtcgccggaagcgcaa
tcggtggttgtaaccaaaatgcacggtttcccgggcatccagctgtcgaacatgccgcag
gacattcaggattccttcaaaggcgtggctgaaggcttccggaccttcaacatcggcgac
ttgggcaatgaaatcaacaaacgctggcaaagcgacgtagcggcgcaatga
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