Paenibacillus sp. JDR-2: Pjdr2_2956
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Entry
Pjdr2_2956 CDS
T00977
Name
(GenBank) ABC transporter related
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pjdr2_2956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pjd02000
]
Pjdr2_2956
01504 Antimicrobial resistance genes [BR:
pjd01504
]
Pjdr2_2956
Transporters [BR:
pjd02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Pjdr2_2956
Antimicrobial resistance genes [BR:
pjd01504
]
Gene variants
Macrolide resistance genes
Transporters
Pjdr2_2956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
MMR_HSR1
KAP_NTPase
RsgA_GTPase
AAA_22
AAA_23
Dynamin_N
AAA
AAA_15
YobI-ATPase
DUF5817_CT
DUF4024
nSTAND1
ABC_tran_Xtn
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
ACT01603
LinkDB
All DBs
Position
3395507..3396985
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVSNLTFAHDGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFMNLLLDKYEYSGH
ISANVTFDYFPFRVEHPEYLTTDVVEEICPDYQQWELMRELTLLQVSDDVLYRPFNTLSN
GEQTKVLLAALFLKEDSFLLIDEPTNHLDMNARKLVSQYLNGKNGFILVSHDRTFLDHCV
DHILSINRTNIEIQKGNFSDWWENKERQNQYELAENDKLKKDIKRLSDAAKRTNNWSHEV
EKTKNGTRNSGSKVDKGYIGHKAAKMMKRSKSMEQRQQSAIDEKSTLLKNIESSDSLKLE
QLVYHKPQLVELERVSVYYGDKEVCSDISFTIEQGERIALSGRNGSGKSSLLKLIIGEDL
TYTGTFRKGSSLKISYVSQDTSHLRGNLTDYAREHGVDESLFKAILRKLDFSRIQFEKDM
SSFSGGQKKKVLIAKSLSEKAHLHIWDEPLNFIDVISRMQIEELLLEHSPTILFVEHDRA
FCENIATKIVEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgattaatgtatcgaaccttacgtttgcccatgacggcagttacgataatatt
tttgagaacgtaagctttcagattgatactgactggaagctgggttttaccggacgcaac
ggccggggaaaaacaaccttcatgaacctgctgcttgacaaatacgagtacagcgggcat
atttcggcgaacgtaacgtttgattactttccgttccgggtagagcatccggaatatcta
acgacggatgtcgtcgaggagatttgtccggattaccagcaatgggagctcatgcgcgaa
ttgacgctgcttcaggtatccgatgacgttctataccggccgttcaatacgttgtcgaac
ggagaacagacgaaggtattgctggctgctttgttccttaaagaagacagcttcctgctt
atcgatgagccaacgaaccatctggacatgaacgcgaggaagctggtcagccaatatttg
aacggcaagaacggttttattctcgtctcccatgaccgtaccttcctggatcattgcgtt
gaccatattctctccataaaccgaacgaatatcgaaattcagaagggcaatttctctgac
tggtgggagaacaaagaacgtcagaatcaatacgagctggcggagaatgataagctgaag
aaagatattaagcgattgtcggatgcggcgaaacgcacgaataactggtctcatgaagtc
gagaagacaaagaacggcacgagaaactccggctccaaggtagacaaaggttatatcgga
cataaagcagccaaaatgatgaagcgctcgaagtcgatggagcaacgccagcaatcggca
atagacgagaaatccacgctgctgaaaaatatcgagtcttccgacagcctcaagctcgag
cagctcgtttaccataagccccagcttgtggagctggagcgggtctcggtctattacggc
gataaggaagtatgctcggacatcagctttacgatcgagcagggggaacgaatcgcgctt
tccggccgtaacggctcagggaaatccagtcttcttaagctgatcatcggagaagacctg
acttataccgggactttccgcaagggaagcagcctcaagatctcttatgtgtcccaggat
acctcccacctgcggggcaacttgacggattacgctagagaacacggagttgacgaaagt
ctctttaaggctattttgcgcaagctggatttctccagaattcagttcgagaaggatatg
tcttccttcagcggaggtcagaagaagaaggttttgattgcgaaaagcttaagcgagaaa
gcgcatcttcatatatgggatgaaccgttgaactttatcgatgtcatctcccgcatgcag
atcgaagagctgctgctggagcattcgccaaccattctgtttgttgagcatgaccgggct
ttctgcgagaatatcgcgactaaaatcgttgaactataa
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