Paenibacillus sp. JDR-2: Pjdr2_3639
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Entry
Pjdr2_3639 CDS
T00977
Name
(GenBank) proprionate catabolism activator, Fis family
Organism
pjd
Paenibacillus sp. JDR-2
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Gene cluster
GFIT
Motif
Pfam:
PrpR_N
Sigma54_activ_2
Sigma54_activat
HTH_8
HTH_24
PAS_8
AAA_22
HTH_23
PAS
HTH_50
AIRC
DUF6362
HetR_C
AAA_14
Hydrolase_like
HTH_7
AAA_16
NPHP3_N
RNA_helicase
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACT02271
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Position
complement(4161471..4163324)
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AA seq
617 aa
AA seq
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MKIKVLAIAPYVGLRDLLLEMVQEETMIRMDVEVADLEEALPLIQQAEERGYDIIISRGG
TANLIRKHSSLPVVDIPVSGYDILRVLTLIRRTNSKVAIIGFPNICKAVAEVSSLLDFEI
PIIQISDQTEVRGALRQAFGDKVQIVLGDAVTVRAAQEMGYHGILITSGKESVGDMFREV
RRVYDVYRQGQEQTMFYRDILDHDARAIIALDDRHRILFINRTAGELLGSSGNAEADALP
GSSIQYSLPALYKLINGAEEADNAAKWSKQFLYLNEQQYKVSVSEGRKEGSFRYLVSLDS
IENWRNERRFAAYIPPRLTTFNQMVGSSVMLNKTIAKAQKYALSDRNLWVSGERGTGKSL
FAQAIHSGSKRHAQGFYMIPCEGMTEQETNLLLKGTAEELGLPETGFGGTIYLNNVDRLD
RGAQDQWLQAIRRYPQIRYIASSSTSLTRLKGKADYNHELIAALGELQLAVPPLKERMED
IDEIIRVMIANYNFQSGKQIVGFRETALDELLRYDWPGNLRELERAIHEMLVLTQGNHVE
KKDAVTVIEQYKESLIADADNVSTTIDLRGTLEEIERRIITYVLQEEGMNQSKTCKRLGM
NRTTFWRKMNKTFNNET
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagttctggctatagccccttatgtaggtttgcgggatttgcttttggaa
atggtgcaagaagaaacgatgattcggatggatgtggaagtagcggatttggaagaagcg
cttccgcttatccagcaagccgaagagcggggctacgacattattatcagccgcggcggt
acggcaaatctgatccgcaagcattcctcgctgccggtcgtggacattccggtatccggg
tacgatattttgcgggtgctgacgcttatccgccgcacgaattccaaggtagccattatc
ggcttcccgaatatatgcaaggcggttgcggaggtgtccagcctgcttgattttgaaatt
ccgattatccagatcagcgaccaaaccgaggttcgcggcgctctgcggcaggcatttggc
gataaggttcagatcgtgctgggggatgccgttacggtccgggccgcgcaagagatgggc
tatcacggcattcttattacctcaggcaaagaatcggtgggcgatatgttccgggaggtt
aggcgcgtatacgacgtttaccggcaaggccaggagcaaacgatgttttacagggacata
ttggaccatgacgccagagccattatcgcgcttgatgaccgacaccggattctgtttatc
aaccggacggcgggagagctgctcggcagcagcgggaatgcggaggcggacgctctgccc
ggcagcagcattcaatattctttaccggcgctatacaagctgataaacggagcggaggag
gcggacaatgccgccaaatggtctaagcagtttctctatttgaacgagcagcaatacaag
gtaagcgttagcgagggccgcaaggaaggaagcttccgctatctggtttcgcttgactca
atcgagaattggcgcaacgagcggagattcgctgcctatattcctcctaggcttacaacg
tttaatcaaatggtgggctccagcgtgatgctgaataaaacgatagcgaaggcgcaaaag
tatgcactaagcgaccgtaacctttgggtttccggcgagaggggaacaggcaaatcgcta
ttcgcccaagcgatccattcgggaagcaaacgccatgcgcaaggcttctatatgattccg
tgcgaagggatgacggagcaggaaaccaatctcctgttaaaaggaacggcggaggagctt
ggtttgcccgagaccgggttcggcggaacgatctatctgaacaatgtggacaggctggac
cgcggagcgcaggatcaatggctgcaggccatacgccggtacccgcaaatccggtatatt
gcctcctcctcgacaagcctaacccgactgaaagggaaagcggactacaaccacgagcta
attgcagcgcttggcgagcttcaattagcggttcctccgttaaaggaacgcatggaggac
atcgatgagatcatccgggtcatgattgcgaattataattttcaatccggcaagcagatc
gtcggtttccgcgaaacggcacttgatgaactgctgcgatacgattggccggggaatttg
cgcgagctggagcgtgccattcacgaaatgcttgtccttacccaaggcaatcatgtagag
aagaaggatgcggtgactgtcattgaacaatataaagagtccttgattgcggatgcggat
aatgtttccaccacgatagacctgcgaggaacgcttgaggaaatcgagcgccggatcatt
acttacgtcttgcaggaggaaggaatgaatcaatccaaaacctgcaagaggctcggaatg
aaccggacaaccttttggaggaaaatgaacaaaacgtttaataatgaaacgtaa
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