Paenibacillus sp. JDR-2: Pjdr2_3768
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Entry
Pjdr2_3768 CDS
T00977
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pjd
Paenibacillus sp. JDR-2
Pathway
pjd00300
Lysine biosynthesis
pjd00470
D-Amino acid metabolism
pjd01100
Metabolic pathways
pjd01110
Biosynthesis of secondary metabolites
pjd01120
Microbial metabolism in diverse environments
pjd01230
Biosynthesis of amino acids
Module
pjd_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
pjd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pjd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pjdr2_3768
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pjdr2_3768
Enzymes [BR:
pjd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pjdr2_3768
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GFIT
Motif
Pfam:
DAP_epimerase
KH_PARP14_3
Motif
Other DBs
NCBI-ProteinID:
ACT02398
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Position
complement(4306495..4307331)
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AA seq
278 aa
AA seq
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MMKFTKMHGLGNDFIVIAGEQQLPGNVAELAKNQCNRFFGIGADGLVYILPSEVADFRMR
IINSDGSEAEQCGNAIRCAAKYIYDNGLTDKEELTIETLGAGAQTVQLEVADGKVQQVRV
DMGAPILNGLQVPTTVDEDRVIEHPIEVDGREFRFTAVSMGNPHCVIYVDDAANFDLATW
GPKLETHPMFPRKINVEFVTVISREHAEMRVWERGAGPTLACGTGACATVVSSVLNGLTD
RTAVVTLKGGDLTIEWNEADNHVYMTGPAAEVYRGEWK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttacaaaaatgcatggtttggggaatgattttatcgttatcgccggcgag
cagcagctgccgggcaatgtagcggagctggcgaaaaaccagtgcaaccggttcttcggt
atcggcgctgacggactggtgtacatccttccttcggaagtggcggatttccgcatgcgc
atcatcaactccgacggttcggaggcggagcaatgcggcaacgcgattcgctgcgcggcg
aaatacatttacgataacggtcttacggataaagaggagttaacgatcgaaacgcttggc
gccggtgcgcagacggttcaactggaagtagcggacggcaaagttcagcaggttcgcgtt
gatatgggcgcgccgattctgaacggcctgcaagtgcctacaacggttgacgaagaccgc
gtaatcgagcatccgattgaagtggacggccgcgaattccggttcacggcggtatcgatg
ggcaaccctcattgcgtgatctatgtggacgatgccgctaactttgatcttgcaacttgg
ggacccaagctagagactcatccgatgttcccgcgcaaaatcaatgtggagttcgttacc
gtaatctcccgcgagcatgcggagatgcgcgtttgggagcgcggagccggaccaacgctg
gcttgcggcaccggcgcatgcgcaacggtcgtttcctccgtattgaacggcttaacggac
cgtactgcggttgtaacgcttaaaggcggagacctgacgattgaatggaacgaagcagat
aatcatgtttatatgactggacctgcagccgaagtataccgcggcgaatggaaatag
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